Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Transcription factors Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	23136
Gene name Gene Name - the full gene name approved by the HGNC.	Erythrocyte membrane protein band 4.1 like 3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	EPB41L3
Synonyms (NCBI Gene) Gene synonyms aliases	4.1B, DAL-1, DAL1
Chromosome Chromosome number	18
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	18p11.31

Show/Hide all(141)

miRTarBase ID	miRNA	Experiments	Reference
MIRT006374	hsa-miR-223-3p	Luciferase reporter assay, Western blot	21628394
MIRT006374	hsa-miR-223-3p	Luciferase reporter assay, Western blot	21628394
MIRT006374	hsa-miR-223-3p	Luciferase reporter assay, Western blot	21628394
MIRT051992	hsa-let-7b-5p	CLASH	23622248
MIRT049330	hsa-miR-92a-3p	CLASH	23622248
MIRT037171	hsa-miR-877-3p	CLASH	23622248
MIRT637424	hsa-miR-548u	HITS-CLIP	23824327
MIRT637423	hsa-miR-7161-5p	HITS-CLIP	23824327
MIRT637422	hsa-miR-4524b-3p	HITS-CLIP	23824327
MIRT637421	hsa-miR-3675-3p	HITS-CLIP	23824327
MIRT637420	hsa-miR-4684-5p	HITS-CLIP	23824327
MIRT551194	hsa-miR-548c-3p	PAR-CLIP	21572407
MIRT551193	hsa-miR-551b-5p	PAR-CLIP	21572407
MIRT551192	hsa-miR-5697	PAR-CLIP	21572407
MIRT551191	hsa-miR-4275	PAR-CLIP	21572407
MIRT551190	hsa-miR-627-3p	PAR-CLIP	21572407
MIRT551189	hsa-miR-1297	PAR-CLIP	21572407
MIRT551188	hsa-miR-26a-5p	PAR-CLIP	21572407
MIRT551187	hsa-miR-26b-5p	PAR-CLIP	21572407
MIRT551186	hsa-miR-4465	PAR-CLIP	21572407
MIRT551185	hsa-miR-498	PAR-CLIP	21572407
MIRT551184	hsa-miR-1305	PAR-CLIP	21572407
MIRT637424	hsa-miR-548u	HITS-CLIP	23824327
MIRT637423	hsa-miR-7161-5p	HITS-CLIP	23824327
MIRT637422	hsa-miR-4524b-3p	HITS-CLIP	23824327
MIRT637421	hsa-miR-3675-3p	HITS-CLIP	23824327
MIRT637420	hsa-miR-4684-5p	HITS-CLIP	23824327
MIRT551194	hsa-miR-548c-3p	PAR-CLIP	21572407
MIRT551193	hsa-miR-551b-5p	PAR-CLIP	21572407
MIRT551192	hsa-miR-5697	PAR-CLIP	21572407
MIRT551191	hsa-miR-4275	PAR-CLIP	21572407
MIRT551190	hsa-miR-627-3p	PAR-CLIP	21572407
MIRT551189	hsa-miR-1297	PAR-CLIP	21572407
MIRT551188	hsa-miR-26a-5p	PAR-CLIP	21572407
MIRT551187	hsa-miR-26b-5p	PAR-CLIP	21572407
MIRT551186	hsa-miR-4465	PAR-CLIP	21572407
MIRT551185	hsa-miR-498	PAR-CLIP	21572407
MIRT551184	hsa-miR-1305	PAR-CLIP	21572407
MIRT965659	hsa-miR-125a-3p	CLIP-seq
MIRT965660	hsa-miR-3665	CLIP-seq
MIRT965661	hsa-miR-4434	CLIP-seq
MIRT965662	hsa-miR-4516	CLIP-seq
MIRT965663	hsa-miR-4531	CLIP-seq
MIRT965664	hsa-miR-657	CLIP-seq
MIRT2220517	hsa-miR-4668-3p	CLIP-seq
MIRT2524342	hsa-miR-1179	CLIP-seq
MIRT2524343	hsa-miR-1245	CLIP-seq
MIRT2524344	hsa-miR-1304	CLIP-seq
MIRT2524345	hsa-miR-141	CLIP-seq
MIRT2524346	hsa-miR-151-3p	CLIP-seq
MIRT2524347	hsa-miR-184	CLIP-seq
MIRT2524348	hsa-miR-19a	CLIP-seq
MIRT2524349	hsa-miR-19b	CLIP-seq
MIRT2524350	hsa-miR-200a	CLIP-seq
MIRT2524351	hsa-miR-2054	CLIP-seq
MIRT2524352	hsa-miR-2113	CLIP-seq
MIRT2524353	hsa-miR-217	CLIP-seq
MIRT2524354	hsa-miR-223	CLIP-seq
MIRT2524355	hsa-miR-300	CLIP-seq
MIRT2524356	hsa-miR-3121-3p	CLIP-seq
MIRT2524357	hsa-miR-329	CLIP-seq
MIRT2524358	hsa-miR-3591-5p	CLIP-seq
MIRT2524359	hsa-miR-3606	CLIP-seq
MIRT2524360	hsa-miR-3607-5p	CLIP-seq
MIRT2524361	hsa-miR-3611	CLIP-seq
MIRT2524362	hsa-miR-3619-3p	CLIP-seq
MIRT2524363	hsa-miR-362-3p	CLIP-seq
MIRT2524364	hsa-miR-3647-3p	CLIP-seq
MIRT2524365	hsa-miR-3685	CLIP-seq
MIRT2524366	hsa-miR-3686	CLIP-seq
MIRT2524367	hsa-miR-381	CLIP-seq
MIRT2524368	hsa-miR-384	CLIP-seq
MIRT2524369	hsa-miR-3940-5p	CLIP-seq
MIRT2524370	hsa-miR-3977	CLIP-seq
MIRT2524371	hsa-miR-409-5p	CLIP-seq
MIRT2524372	hsa-miR-4259	CLIP-seq
MIRT2524373	hsa-miR-4305	CLIP-seq
MIRT2524374	hsa-miR-4471	CLIP-seq
MIRT2524375	hsa-miR-4477b	CLIP-seq
MIRT2524376	hsa-miR-4495	CLIP-seq
MIRT2524377	hsa-miR-4507	CLIP-seq
MIRT2524378	hsa-miR-4539	CLIP-seq
MIRT2524379	hsa-miR-4728-3p	CLIP-seq
MIRT2524380	hsa-miR-4729	CLIP-seq
MIRT2524381	hsa-miR-4775	CLIP-seq
MIRT2524382	hsa-miR-4776-5p	CLIP-seq
MIRT2524383	hsa-miR-4778-5p	CLIP-seq
MIRT2524384	hsa-miR-579	CLIP-seq
MIRT2524385	hsa-miR-582-5p	CLIP-seq
MIRT2524386	hsa-miR-586	CLIP-seq
MIRT2524387	hsa-miR-590-3p	CLIP-seq
MIRT2524388	hsa-miR-642b	CLIP-seq
MIRT2524389	hsa-miR-758	CLIP-seq
MIRT2524390	hsa-miR-760	CLIP-seq
MIRT2524391	hsa-miR-921	CLIP-seq
MIRT2524342	hsa-miR-1179	CLIP-seq
MIRT2524343	hsa-miR-1245	CLIP-seq
MIRT2524344	hsa-miR-1304	CLIP-seq
MIRT2524345	hsa-miR-141	CLIP-seq
MIRT2524346	hsa-miR-151-3p	CLIP-seq
MIRT2524347	hsa-miR-184	CLIP-seq
MIRT2524350	hsa-miR-200a	CLIP-seq
MIRT2524351	hsa-miR-2054	CLIP-seq
MIRT2524352	hsa-miR-2113	CLIP-seq
MIRT2524354	hsa-miR-223	CLIP-seq
MIRT2524355	hsa-miR-300	CLIP-seq
MIRT2524356	hsa-miR-3121-3p	CLIP-seq
MIRT2524357	hsa-miR-329	CLIP-seq
MIRT2524358	hsa-miR-3591-5p	CLIP-seq
MIRT2524359	hsa-miR-3606	CLIP-seq
MIRT2524361	hsa-miR-3611	CLIP-seq
MIRT2524362	hsa-miR-3619-3p	CLIP-seq
MIRT2524363	hsa-miR-362-3p	CLIP-seq
MIRT2524364	hsa-miR-3647-3p	CLIP-seq
MIRT2524365	hsa-miR-3685	CLIP-seq
MIRT2524366	hsa-miR-3686	CLIP-seq
MIRT2524367	hsa-miR-381	CLIP-seq
MIRT2524368	hsa-miR-384	CLIP-seq
MIRT2524369	hsa-miR-3940-5p	CLIP-seq
MIRT2524370	hsa-miR-3977	CLIP-seq
MIRT2524371	hsa-miR-409-5p	CLIP-seq
MIRT2524372	hsa-miR-4259	CLIP-seq
MIRT2524373	hsa-miR-4305	CLIP-seq
MIRT2524374	hsa-miR-4471	CLIP-seq
MIRT2524375	hsa-miR-4477b	CLIP-seq
MIRT2524376	hsa-miR-4495	CLIP-seq
MIRT2524377	hsa-miR-4507	CLIP-seq
MIRT2524378	hsa-miR-4539	CLIP-seq
MIRT2524379	hsa-miR-4728-3p	CLIP-seq
MIRT2524380	hsa-miR-4729	CLIP-seq
MIRT2524381	hsa-miR-4775	CLIP-seq
MIRT2524382	hsa-miR-4776-5p	CLIP-seq
MIRT2524383	hsa-miR-4778-5p	CLIP-seq
MIRT2524384	hsa-miR-579	CLIP-seq
MIRT2524385	hsa-miR-582-5p	CLIP-seq
MIRT2524386	hsa-miR-586	CLIP-seq
MIRT2524387	hsa-miR-590-3p	CLIP-seq
MIRT2524388	hsa-miR-642b	CLIP-seq
MIRT2524389	hsa-miR-758	CLIP-seq
MIRT2524390	hsa-miR-760	CLIP-seq
MIRT2524391	hsa-miR-921	CLIP-seq

Transcription factors

Show/Hide all(1)

Transcription factor	Regulation	Reference
ERG	Repression	20860828

Show/Hide all(40)

GO ID	Ontology	Definition	Evidence	Reference
GO:0002175	Process	Protein localization to paranode region of axon	ISS
GO:0003779	Function	Actin binding	IEA
GO:0005198	Function	Structural molecule activity	IEA
GO:0005200	Function	Structural constituent of cytoskeleton	TAS	21966409
GO:0005515	Function	Protein binding	IPI	12234973, 20936779, 24366813, 25416956, 32296183, 33961781, 36931259
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	IDA
GO:0005829	Component	Cytosol	TAS
GO:0005856	Component	Cytoskeleton	IBA
GO:0005856	Component	Cytoskeleton	IEA
GO:0005886	Component	Plasma membrane	IBA
GO:0005886	Component	Plasma membrane	IDA
GO:0005886	Component	Plasma membrane	IEA
GO:0005886	Component	Plasma membrane	NAS	9892180
GO:0005911	Component	Cell-cell junction	IDA	12234973
GO:0005929	Component	Cilium	IDA
GO:0006915	Process	Apoptotic process	IEA
GO:0008092	Function	Cytoskeletal protein binding	IEA
GO:0008150	Process	Biological_process	ND
GO:0008360	Process	Regulation of cell shape	ISS
GO:0016020	Component	Membrane	IEA
GO:0030054	Component	Cell junction	IDA
GO:0030673	Component	Axolemma	ISS
GO:0030865	Process	Cortical cytoskeleton organization	TAS	21966409
GO:0030866	Process	Cortical actin cytoskeleton organization	IEA
GO:0030913	Process	Paranodal junction assembly	ISS
GO:0031032	Process	Actomyosin structure organization	IBA
GO:0033270	Component	Paranode region of axon	IEA
GO:0033270	Component	Paranode region of axon	ISS
GO:0036064	Component	Ciliary basal body	IDA
GO:0043217	Process	Myelin maintenance	ISS
GO:0044224	Component	Juxtaparanode region of axon	ISS
GO:0048812	Process	Neuron projection morphogenesis	ISS
GO:0070161	Component	Anchoring junction	IEA
GO:0071205	Process	Protein localization to juxtaparanode region of axon	ISS
GO:0072659	Process	Protein localization to plasma membrane	ISS
GO:0098696	Process	Regulation of neurotransmitter receptor localization to postsynaptic specialization membrane	IEA
GO:0098794	Component	Postsynapse	IEA
GO:0098978	Component	Glutamatergic synapse	IEA
GO:0106006	Function	Cytoskeletal protein-membrane anchor activity	TAS	21966409

MIM	HGNC	e!Ensembl
605331	3380	ENSG00000082397

Protein

UniProt ID

Q9Y2J2

Protein name

Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1) (Erythrocyte membrane protein band 4.1-like 3) [Cleaved into: Band 4.1-like protein 3, N-terminally processed]

Protein function

Tumor suppressor that inhibits cell proliferation and promotes apoptosis. Modulates the activity of protein arginine N-methyltransferases, including PRMT3 and PRMT5. {ECO:0000269|PubMed:15334060, ECO:0000269|PubMed:15737618, ECO:0000269|PubMed:1

PDB

2HE7 , 3BIN , 5RYM , 5RYN , 5RYO , 5RYP , 5RYQ , 5RYR , 5RYS , 5RYT , 5RYU , 5RYV , 5RYW , 5RYX , 5RYY , 5RYZ , 5RZ0 , 5RZ1 , 5RZ2 , 5RZ3 , 5RZ4 , 5RZ5 , 5RZ6 , 5RZ7 , 5RZ8 , 5RZ9 , 5RZA , 5RZB , 5RZC , 5RZD , 5RZE , 5RZF , 5RZG , 5RZH , 5RZI , 5RZJ , 5RZK , 5RZL , 5RZM , 5RZN , 5RZO , 5RZP , 5RZQ , 5RZR , 5RZS , 5RZT , 5RZU , 5RZV , 5RZW , 5RZX , 5RZY

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF09379	FERM_N	114 → 177	FERM N-terminal domain	Domain
PF00373	FERM_M	192 → 301	FERM central domain	Domain
PF09380	FERM_C	305 → 395	FERM C-terminal PH-like domain	Domain
PF08736	FA	398 → 441	FERM adjacent (FA)	Family
PF04382	SAB	717 → 765	SAB domain	Domain
PF05902	4_1_CTD	973 → 1079	4.1 protein C-terminal domain (CTD)	Domain

Tissue specificity

TISSUE SPECIFICITY: Expressed at high levels in brain, with lower levels in kidney, intestine, and testis. Detected in lung. {ECO:0000269|PubMed:9892180}.

Sequence

MTTESGSDSESKPDQEAEPQEAAGAQGRAGAPVPEPPKEEQQQALEQFAAAAAHSTPVRR
EVTDKEQEFAARAAKQLEYQQLEDDKLSQKSSSSKLSRSPLKIVKKPKSMQCKVILLDGS
EYTCDVEKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQVRSGAW
HFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDY
DPDECGSDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDL
HHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFE
STIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRAS
ALIDRPAPYFERSSSKRYTMSRSLDGEVGTGQYATTKGISQTNLITTVTPEKKAEEERDE
EEDKRRKGEEVTPISAIRHEGKSPGLGTDSCPLSPPSTHCAPTSPTELRRRCKENDCKLP
GYEPSRAEHLPGEPALDSDGPGRPYLGDQDVAFSYRQQTGKGTTLFSFSLQLPESFPSLL
DDDGYLSFPNLSETNLLPQSLQHYLPIRSPSLVPCFLFIFFFLLSASFSVPYALTLSFPL
ALCLCYLEPKAASLSASLDNDPSDSSEEETDSERTDTAADGETTATESDQEEDAELKAQE
LEKTQDDLMKHQTNISELKRTFLETSTDTAVTNEWEKRLSTSPVRLAARQEDAPMIEPLV
PEETKQSSGEKLMDGSEIFSLLESARKPTEFIGGVTSTSQSWVQKMETKTESSGIETEPT
VHHLPLSTEKVVQETVLVEERRVVHASGDASYSAGDSGDAAAQPAFTGIKGKEGSALTEG
AKEEGGEEVAKAVLEQEETAAASRERQEEQSAAIHISETLEQKPHFESSTVKTETISFGS
VSPGGVKLEISTKEVPVVHTETKTITYESSQVDPGTDLEPGVLMSAQTITSETTSTTTTT
HITKTVKGGISETRIEKRIVITGDADIDHDQALAQAIKEAKEQHPDMSVTKVVVHKETEI
TPEDGED

Sequence length

1087

Interactions

View interactions

	Reactome
			Neurexins and neuroligins

Show/Hide Unknown Diseases (2)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Breast cancer	Breast cancer	N/A	N/A	GWAS
Kidney Disease	Chronic kidney disease	N/A	N/A	GWAS

Show/Hide Text Mining Associations (39)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Adenocarcinoma of Lung	Associate	11996670, 19846932, 39354571
Anaplasia	Associate	14601094
Anodontia	Associate	31828581
Azoospermia	Associate	37283758
Brain Neoplasms	Inhibit	15731777
Breast Neoplasms	Inhibit	11996670
Breast Neoplasms	Associate	19846932
Carcinoma Ovarian Epithelial	Inhibit	20651987
Colitis Ulcerative	Associate	36445533
Colorectal Neoplasms	Inhibit	31828581
Colorectal Neoplasms	Associate	33893082, 40001597
COVID 19	Associate	37283758
Esophageal Squamous Cell Carcinoma	Associate	25050929
Familial ependymoma	Associate	15731777
Glioma	Associate	25621889
Heart Diseases	Associate	28009100
Hereditary Breast and Ovarian Cancer Syndrome	Associate	25830725
Hypomagnesemia primary	Stimulate	24508839
Idiopathic Pulmonary Fibrosis	Stimulate	37373330
Melanoma	Inhibit	31171904
Meningioma	Inhibit	11996670
Neoplasm Metastasis	Inhibit	31171904
Neoplasms	Inhibit	11996670, 17280610, 20860828, 25621889, 25830725, 31828581, 33323539, 35619332, 39354571
Neoplasms	Associate	14601094, 24508839, 32048621, 33893082
Neoplasms	Stimulate	25050929
Oropharyngeal Neoplasms	Associate	31304592, 35619332, 38286404
Osteosarcoma	Stimulate	33323539
Ovarian Neoplasms	Associate	20651987
Prostatic Neoplasms	Inhibit	17280610
Prostatic Neoplasms	Associate	20860828
Renal cell carcinoma 1	Associate	39354571
Squamous Cell Carcinoma of Head and Neck	Associate	32048621
Stomach Diseases	Inhibit	31828581
Stomach Neoplasms	Associate	34579655, 39354571
Thyroid Cancer Papillary	Associate	30278442
Uterine Cervical Dysplasia	Stimulate	24508839
Uterine Cervical Dysplasia	Associate	31606044
Uterine Cervical Neoplasms	Associate	25830725, 28500655, 32368784, 32576279
Uterine Cervicitis	Associate	26406956

EPB41L3 (erythrocyte membrane protein band 4.1 like 3)