Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
2047
Gene name Gene Name - the full gene name approved by the HGNC.
EPH receptor B1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
EPHB1
Synonyms (NCBI Gene) Gene synonyms aliases
ELK, EPHT2, Hek6, NET
Chromosome Chromosome number
3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
3q22.2
Summary Summary of gene provided in NCBI Entrez Gene.
Ephrin receptors and their ligands, the ephrins, mediate numerous developmental processes, particularly in the nervous system. Based on their structures and sequence relationships, ephrins are divided into the ephrin-A (EFNA) class, which are anchored to
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT438671 hsa-miR-128-3p Luciferase reporter assay, qRT-PCR, Western blot 23835497
MIRT438671 hsa-miR-128-3p Luciferase reporter assay, qRT-PCR, Western blot 23835497
MIRT438671 hsa-miR-128-3p Luciferase reporter assay, qRT-PCR, Western blot 23835497
MIRT438671 hsa-miR-128-3p Luciferase reporter assay, qRT-PCR, Western blot 23835497
MIRT624017 hsa-miR-1250-3p HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001525 Process Angiogenesis IDA 9499402
GO:0004714 Function Transmembrane receptor protein tyrosine kinase activity IBA 21873635
GO:0005005 Function Transmembrane-ephrin receptor activity IBA 21873635
GO:0005005 Function Transmembrane-ephrin receptor activity IDA 18034775
GO:0005515 Function Protein binding IPI 8798570, 9499402, 12223469, 12925710, 18034775
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
600600 3392 ENSG00000154928
Protein
UniProt ID P54762
Protein name Ephrin type-B receptor 1 (EC 2.7.10.1) (ELK) (EPH tyrosine kinase 2) (EPH-like kinase 6) (EK6) (hEK6) (Neuronally-expressed EPH-related tyrosine kinase) (NET) (Tyrosine-protein kinase receptor EPH-2)
Protein function Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is
PDB 2DJS , 2EAO , 3ZFX , 5MJA , 5MJB , 6UMW , 7KPL , 7KPM
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01404 Ephrin_lbd 20 196 Ephrin receptor ligand binding domain Domain
PF00041 fn3 324 418 Fibronectin type III domain Domain
PF00041 fn3 434 518 Fibronectin type III domain Domain
PF14575 EphA2_TM 542 616 Ephrin type-A receptor 2 transmembrane domain Domain
PF07714 PK_Tyr_Ser-Thr 619 878 Protein tyrosine and serine/threonine kinase Domain
PF00536 SAM_1 909 973 SAM domain (Sterile alpha motif) Domain
Tissue specificity TISSUE SPECIFICITY: Preferentially expressed in brain.
Sequence
MALDYLLLLLLASAVAAMEETLMDTRTATAELGWTANPASGWEEVSGYDENLNTIRTYQV
CNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNVPGSCKETFNLYYYETDSV
IATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDY
GACMSLLSVRVFFKKC
PSIVQNFAVFPETMTGAESTSLVIARGTCIPNAEEVDVPIKLYC
NGDGEWMVPIGRCTCKPGYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPAEASPI
CTCRTGYYRADFDPPEVACTSVPSGPRNVISIVNETSIILEWHPPRETGGRDDVTYNIIC
KKCRADRRSCSRCDDNVEFVPRQLGLTECRVSISSLWAHTPYTFDIQAINGVSSKSPF
PP
QHVSVNITTNQAAPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFN
SSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFS
GKMCFQTLTDDDYKSELREQLP
LIAGSAAAGVVFVVSLVAISIVCSRKRAYSKEAVYSDKLQHYSTGRGSPGMKIYIDPFTY
EDPNEAVREFAKEIDV
SFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEK
QRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQ
LVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTS
SLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQD
YRLPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTL
DKMIRNPASLKTVATITAVPSQ
PLLDRSIPDFTAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAG
HQKKILNSIHSMR
VQISQSPTAMA
Sequence length 984
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Axon guidance   EPH-Ephrin signaling
EPHB-mediated forward signaling
Ephrin signaling
EPH-ephrin mediated repulsion of cells
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colorectal neoplasms Secondary malignant neoplasm of colon and/or rectum rs28929483, rs63751108, rs28929484, rs63749831, rs63750047, rs63751207, rs63749811, rs1553350126, rs63750875, rs63750955, rs587776706, rs63750871, rs587776715, rs63751466, rs63750049
View all (1682 more)
30738427
Epilepsy Epilepsy rs113994140, rs28937874, rs1589762127, rs104894166, rs28939075, rs2134001459, rs104894167, rs119488099, rs119488100, rs387906420, rs121917752, rs121918622, rs281865564, rs387907313, rs397514670
View all (165 more)
26220383
Gastric cancer Gastric Adenocarcinoma rs137854571, rs63751108, rs34612342, rs121908383, rs121909144, rs121909775, rs121909219, rs121909223, rs63750871, rs80359530, rs121964873, rs121913530, rs606231203, rs121918505, rs587776802
View all (244 more)
Lung adenocarcinoma Adenocarcinoma of lung (disorder) rs28934576, rs121913530, rs397516975, rs587776805, rs121913469, rs121913364, rs121913351, rs121913366, rs397516896, rs397516977, rs397516981, rs397517127, rs121913344, rs727504233, rs121913370
View all (5 more)
29924316
Unknown
Disease term Disease name Evidence References Source
Neuroticism Neuroticism GWAS
Schizophrenia Schizophrenia GWAS
Metabolic Syndrome Metabolic Syndrome GWAS
Asthma Asthma GWAS
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma Associate 22491060, 24606480
Adenoma Associate 25562676
Breast Neoplasms Associate 29402903
Carcinoma Hepatocellular Associate 31730575, 37021545
Carcinoma Renal Cell Associate 25120806
Carcinoma Squamous Cell Associate 22491060, 24606480, 31551362
Colorectal Neoplasms Inhibit 24427352, 25120806
Colorectal Neoplasms Associate 27398792, 38102712
Drug Hypersensitivity Associate 33261109
Endometrial Neoplasms Associate 36581816