Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
203286
Gene name Gene Name - the full gene name approved by the HGNC.
Ankyrin repeat and sterile alpha motif domain containing 6
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ANKS6
Synonyms (NCBI Gene) Gene synonyms aliases
ANKRD14, NPHP16, PKDR1, SAMD6
Disease Acronyms (UniProt) Disease acronyms from UniProt database
NPHP16
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q22.33
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a protein containing multiple ankyrin repeats and a SAM domain. It is thought that this protein may localize to the proximal region of the primary cilium, and may play a role in renal and cardiovascular development. Mutations in this gen
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs79073889 C>A,T Conflicting-interpretations-of-pathogenicity, benign Non coding transcript variant, upstream transcript variant, coding sequence variant, missense variant, genic upstream transcript variant
rs199851177 G>A Conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant, non coding transcript variant
rs369437168 G>A Pathogenic Stop gained, non coding transcript variant, coding sequence variant
rs377750405 T>C Benign, pathogenic-likely-pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs397514257 G>C Pathogenic, likely-pathogenic Intron variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT022581 hsa-miR-124-3p Microarray 18668037
MIRT645462 hsa-miR-4731-3p HITS-CLIP 23824327
MIRT645461 hsa-miR-4801 HITS-CLIP 23824327
MIRT645460 hsa-miR-3938 HITS-CLIP 23824327
MIRT645459 hsa-miR-3928-3p HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001701 Process In utero embryonic development IEA
GO:0001822 Process Kidney development IEA
GO:0005515 Function Protein binding IPI 24998259, 32296183
GO:0005737 Component Cytoplasm IBA 21873635
GO:0007368 Process Determination of left/right symmetry IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
615370 26724 ENSG00000165138
Protein
UniProt ID Q68DC2
Protein name Ankyrin repeat and SAM domain-containing protein 6 (Ankyrin repeat domain-containing protein 14) (SamCystin) (Sterile alpha motif domain-containing protein 6) (SAM domain-containing protein 6)
Protein function Required for renal function.
PDB 4NL9
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF12796 Ank_2 13 141 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 148 255 Ankyrin repeats (3 copies) Repeat
PF13637 Ank_4 192 257 Repeat
PF12796 Ank_2 294 390 Ankyrin repeats (3 copies) Repeat
PF00536 SAM_1 774 834 SAM domain (Sterile alpha motif) Domain
Sequence
MGEGGLPPAFQLLLRACDQGDTETARRLLEPGAAEPAERGAEPEAGAEPAGAEVAGPGAA
AAGAVGAPVPVDCSDEAGNTALQFAAAGGHEPLVRFLLRRGASVNSRNHYGWSALMQAAR
FGHVSVAHLLLDHGADVNAQN
RLGASVLTVASRGGHLGVVKLLLEAGAFVDHHHPSGEQL
GLGGSRDEPLD
ITALMAAIQHGHEAVVRLLMEWGADPNHAARTVGWSPLMLAALTGRLGV
AQQLVEKGANPDHLS
VL
EKTAFEVALDCKHRDLVDYLDPLTTVRPKTDEEKRRPDIFHAL
KMGNFQLVKEIADEDPSHVNLVNGDGATPLMLAAVTGQLALVQLLVERHADVDKQDSVHG
WTALMQATYHGNKEIVKYLLNQGADVTLRA
KNGYTAFDLVMLLNDPDTELVRLLASVCMQ
VNKDKGRPSHQPPLPHSKVRQPWSIPVLPDDKGGLKSWWNRMSNRFRKLKLMQTLPRGLS
SNQPLPFSDEPEPALDSTMRAAPQDKTSRSALPDAAPVTKDNGPGSTRGEKEDTLLTTML
RNGAPLTRLPSDKLKAVIPPFLPPSSFELWSSDRSRTRHNGKADPMKTALPQRASRGHPV
GGGGTDTTPVRPVKFPSLPRSPASSANSGNFNHSPHSSGGSSGVGVSRHGGELLNRSGGS
IDNVLSQIAAQRKKAAGLLEQKPSHRSSPVGPAPGSSPSELPASPAGGSAPVGKKLETSK
RPPSGTSTTSKSTSPTLTPSPSPKGHTAESSVSSSSSHRQSKSSGGSSSGTITDEDELTG
ILKKLSLEKYQPIFEEQEVDMEAFLTLTDGDLKELGIKTDGSRQQILAAISELN
AGKGRE
RQILQETIHNFHSSFESSASNTRAPGNSPCA
Sequence length 871
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Cholestasis Cholestasis rs121909103, rs751511532, rs376368459, rs762702807, rs1578490102, rs1578499691, rs1578504946, rs1317656688, rs199791850, rs1452792080, rs1578491039
Nephronophthisis Nephronophthisis, Nephronophthisis, familial juvenile, NEPHRONOPHTHISIS 2, NEPHRONOPHTHISIS 16, Infantile nephronophthisis, Juvenile nephronophthisis rs62635288, rs267607116, rs201893408, rs267607117, rs202149403, rs118204032, rs121918244, rs750962965, rs1474058708, rs119456959, rs119456960, rs119456961, rs119456962, rs267606916, rs137852856
View all (190 more)
23793029, 2379302
Polycystic kidney disease Polycystic Kidney Diseases, Polycystic Kidney, Autosomal Dominant, Polycystic Kidney, Type 1 Autosomal Dominant Disease, Polycystic kidney disease, type 2 rs119103233, rs886041027, rs886041028, rs137852944, rs28937907, rs137852947, rs137852948, rs137852949, rs137852950, rs267607048, rs2147483647, rs199476094, rs1567154953, rs199476095, rs199476096
View all (740 more)
12089381
Renal insufficiency Renal Insufficiency rs1596536873
Unknown
Disease term Disease name Evidence References Source
Metabolic Syndrome Metabolic Syndrome GWAS
Associations from Text Mining
Disease Name Relationship Type References
Autism Spectrum Disorder Associate 34069769
Chronic Kidney Disease Mineral and Bone Disorder Associate 24610927
Cleft Lip Associate 18978678
Congenital Abnormalities Associate 18978678
Kidney Diseases Associate 39596574
Kidney Failure Chronic Associate 24610927
Nephritis Interstitial Associate 24610927
Nephronophthisis familial juvenile Associate 17617513, 24610927, 32994509, 39596574
Polycystic Kidney Diseases Associate 39596574