Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
2009
Gene name Gene Name - the full gene name approved by the HGNC.
EMAP like 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
EML1
Synonyms (NCBI Gene) Gene synonyms aliases
BH, ELP79, EMAP, EMAP-1, EMAPL
Disease Acronyms (UniProt) Disease acronyms from UniProt database
BH
Chromosome Chromosome number
14
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
14q32.2
Summary Summary of gene provided in NCBI Entrez Gene.
Human echinoderm microtubule-associated protein-like is a strong candidate for the Usher syndrome type 1A gene. Usher syndromes (USHs) are a group of genetic disorders consisting of congenital deafness, retinitis pigmentosa, and vestibular dysfunction of
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs886037935 C>A,T Pathogenic Coding sequence variant, 5 prime UTR variant, stop gained, synonymous variant
rs886037936 A>G Pathogenic Coding sequence variant, missense variant
rs886037937 T>C Pathogenic Coding sequence variant, missense variant
rs1555404109 C>T Pathogenic Stop gained, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT023114 hsa-miR-124-3p Microarray 18668037
MIRT024499 hsa-miR-215-5p Microarray 19074876
MIRT026844 hsa-miR-192-5p Microarray 19074876
MIRT046216 hsa-miR-27b-3p CLASH 23622248
MIRT046216 hsa-miR-27b-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000226 Process Microtubule cytoskeleton organization IBA 21873635
GO:0000226 Process Microtubule cytoskeleton organization ISS
GO:0005509 Function Calcium ion binding NAS 9226380
GO:0005515 Function Protein binding IPI 16189514, 19060904, 32814053
GO:0005829 Component Cytosol ISS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602033 3330 ENSG00000066629
Protein
UniProt ID O00423
Protein name Echinoderm microtubule-associated protein-like 1 (EMAP-1) (HuEMAP-1)
Protein function Modulates the assembly and organization of the microtubule cytoskeleton, and probably plays a role in regulating the orientation of the mitotic spindle and the orientation of the plane of cell division. Required for normal proliferation of neuro
PDB 4CI8
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03451 HELP 185 259 HELP motif Family
PF00400 WD40 261 309 WD domain, G-beta repeat Repeat
PF00400 WD40 615 653 WD domain, G-beta repeat Repeat
PF00400 WD40 662 700 WD domain, G-beta repeat Repeat
PF00400 WD40 774 813 WD domain, G-beta repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Ubiquitous; expressed in most tissues with the exception of thymus and peripheral blood lymphocytes. {ECO:0000269|PubMed:10521658}.
Sequence
MEDGFSSYSSLYDTSSLLQFCNDDSASAASSMEVTDRIASLEQRVQMQEDDIQLLKSALA
DVVRRLNITEEQQAVLNRKGPTKARPLMQTLPLRTTVNNGTVLPKKPTGSLPSPSGVRKE
TAVPATKSNIKRTSSSERVSPGGRRESNGDSRGNRNRTGSTSSSSSGKKNSESKPKEPVF
SAEEGYVKMFLRGRPVTMYMPKDQVDSYSLEAKVELPTKRLKLEWVYGYRGRDCRNNLYL
LPTGETVYFIASVVVLYNV
EEQLQRHYAGHNDDVKCLAVHPDRITIATGQVAGTSKDGKQ
LPPHVRIWD
SVTLNTLHVIGIGFFDRAVTCIAFSKSNGGTNLCAVDDSNDHVLSVWDWQK
EEKLADVKCSNEAVFAADFHPTDTNIIVTCGKSHLYFWTLEGSSLNKKQGLFEKQEKPKF
VLCVTFSENGDTITGDSSGNILVWGKGTNRISYAVQGAHEGGIFALCMLRDGTLVSGGGK
DRKLISWSGNYQKLRKTEIPEQFGPIRTVAEGKGDVILIGTTRNFVLQGTLSGDFTPITQ
GHTDELWGLAIHASKSQFLTCGHDKHATLWDAVGHRPVWDKIIEDPAQSSGFHPSGSVVA
VGTLTGRWFVFDTETKDLVTVHTDGNEQLSVMRYSPDGNFLAIGSHDNCIYIYGVSDNGR
KYTRVGKCSGHSSFITHLDWSVNSQFLVSNSGDYEILYWVPSACKQVVSVETTRDIEWAT
YTCTLGFHVFGVWPEGSDGTDINAVCRAHEKKLLSTGDDFGKVHLFSYPCSQFRAPSHIY
GGHSSHVTNVDFLCEDSHLISTGGKDTSIMQWR
VI
Sequence length 815
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Agenesis of corpus callosum Agenesis of corpus callosum rs754914260, rs1057519053, rs1057519056, rs1057519054, rs1057519055, rs1057519057, rs1384496494, rs1599017933
Band heterotopia of brain Band Heterotopia of Brain rs886037935, rs886037936, rs886037937, rs1555404109
Coronary artery disease Coronary Artery Disease rs137852988, rs121918313, rs121918529, rs121918531, rs137852340, rs1555800701, rs1215189537 29212778
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Unknown
Disease term Disease name Evidence References Source
Mental depression Major Depressive Disorder 30219690 ClinVar
Subcortical Band Heterotopia subcortical band heterotopia GenCC
Associations from Text Mining
Disease Name Relationship Type References
Ciliary Motility Disorders Associate 34211111
Classical Lissencephalies and Subcortical Band Heterotopias Associate 34211111
Periventricular Nodular Heterotopia Associate 34211111
Precursor T Cell Lymphoblastic Leukemia Lymphoma Associate 15713800