Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1908
Gene name Gene Name - the full gene name approved by the HGNC.
Endothelin 3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
EDN3
Synonyms (NCBI Gene) Gene synonyms aliases
ET-3, ET3, HSCR4, PPET3, WS4B
Disease Acronyms (UniProt) Disease acronyms from UniProt database
HSCR4, WS4B
Chromosome Chromosome number
20
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
20q13.32
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the endothelin family. Endothelins are endothelium-derived vasoactive peptides involved in a variety of biological functions. The active form of this protein is a 21 amino acid peptide processed from the pre
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs11570344 A>-,AA Likely-pathogenic, pathogenic, benign-likely-benign, likely-benign Intron variant, coding sequence variant, non coding transcript variant, frameshift variant
rs11570351 G>A Risk-factor, likely-benign Missense variant, coding sequence variant, 3 prime UTR variant, non coding transcript variant
rs74315384 G>T Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs74315385 C>A,T Pathogenic Stop gained, coding sequence variant, non coding transcript variant, synonymous variant
rs267606778 A>G Pathogenic Coding sequence variant, missense variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT495210 hsa-miR-4668-3p PAR-CLIP 23708386
MIRT495208 hsa-miR-4282 PAR-CLIP 23708386
MIRT495209 hsa-miR-605-5p PAR-CLIP 23708386
MIRT495207 hsa-miR-3606-3p PAR-CLIP 23708386
MIRT495206 hsa-miR-513a-3p PAR-CLIP 23708386
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001755 Process Neural crest cell migration IEA
GO:0002690 Process Positive regulation of leukocyte chemotaxis IDA 9696419
GO:0003100 Process Regulation of systemic arterial blood pressure by endothelin IBA 21873635
GO:0003100 Process Regulation of systemic arterial blood pressure by endothelin IDA 2649896
GO:0005102 Function Signaling receptor binding TAS 8298278
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
131242 3178 ENSG00000124205
Protein
UniProt ID P14138
Protein name Endothelin-3 (ET-3) (Preproendothelin-3) (PPET3)
Protein function Endothelins are endothelium-derived vasoconstrictor peptides.
PDB 6IGK
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00322 Endothelin 93 121 Endothelin family Repeat
Tissue specificity TISSUE SPECIFICITY: Expressed in trophoblasts and placental stem villi vessels, but not in cultured placental smooth muscle cells. {ECO:0000269|PubMed:9284755}.
Sequence
MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG
PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT
P
EQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS
SNSRTAEKTDKEEEGKVEVKDQQSKQALDLHHPKLMPGSGLALAPSTCPRCLFQEGAP
Sequence length 238
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  cAMP signaling pathway
Neuroactive ligand-receptor interaction
Vascular smooth muscle contraction
Renin secretion
  Peptide ligand-binding receptors
G alpha (q) signalling events
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Congenital central hypoventilation Congenital central hypoventilation rs587776626, rs1733878065, rs761018157, rs779557320, rs772448418, rs775006915, rs1733941453, rs73810366 9359047, 8696331
Haddad syndrome CCHS WITH HIRSCHSPRUNG DISEASE rs1297909281, rs587776626, rs1733941453, rs73810366 8696331
Hearing loss Sensorineural Hearing Loss (disorder) rs267607135, rs267606855, rs779841884, rs267606854, rs28942097, rs121908073, rs121908076, rs74315289, rs121908144, rs111033313, rs74315437, rs121908348, rs121908349, rs121908350, rs397515359
View all (184 more)
Hirschsprung disease Hirschsprung Disease, Hirschsprung disease rs76262710, rs75996173, rs77316810, rs75076352, rs76534745, rs76764689, rs76449634, rs377767412, rs193922699, rs75030001, rs606231342, rs1553540620, rs759944122, rs1057519322, rs1057519323
View all (4 more)
9359047, 8630502, 8630503, 8896568
Unknown
Disease term Disease name Evidence References Source
Waardenburg Syndrome Waardenburg syndrome type 4B, Waardenburg syndrome GenCC
Hirschsprung Disease Hirschsprung disease, susceptibility to, 4 GenCC
Biliary Atresia Biliary Atresia GWAS
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 34745015
Atherosclerosis Associate 28880927
Bacteremia Associate 31167651
Breast Neoplasms Associate 19527488, 24489661
Carcinogenesis Inhibit 33537832
Choriocarcinoma Associate 18362896
Colorectal Neoplasms Associate 26684626
Cross Infection Associate 31167651
Deafness Associate 8630503
Endometrial Neoplasms Associate 36542159