Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1902
Gene name Gene Name - the full gene name approved by the HGNC.
Lysophosphatidic acid receptor 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
LPAR1
Synonyms (NCBI Gene) Gene synonyms aliases
EDG2, Gpcr26, LPA1, Mrec1.3, VZG1, edg-2, rec.1.3, vzg-1
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q31.3
Summary Summary of gene provided in NCBI Entrez Gene.
The integral membrane protein encoded by this gene is a lysophosphatidic acid (LPA) receptor from a group known as EDG receptors. These receptors are members of the G protein-coupled receptor superfamily. Utilized by LPA for cell signaling, EDG receptors
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT007343 hsa-miR-200c-3p Luciferase reporter assay, qRT-PCR, Western blot 23272142
MIRT054919 hsa-miR-23a-3p Luciferase reporter assay, qRT-PCR, Western blot 23711961
MIRT737428 hsa-miR-892b Luciferase reporter assay, Western blotting, Microarray, qRT-PCR 31851778
MIRT1115421 hsa-miR-1238 CLIP-seq
MIRT1115422 hsa-miR-2116 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001965 Function G-protein alpha-subunit binding IEA
GO:0004930 Function G protein-coupled receptor activity IEA
GO:0004930 Function G protein-coupled receptor activity TAS 8922387
GO:0005515 Function Protein binding IPI 19306925
GO:0005543 Function Phospholipid binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602282 3166 ENSG00000198121
Protein
UniProt ID Q92633
Protein name Lysophosphatidic acid receptor 1 (LPA receptor 1) (LPA-1) (Lysophosphatidic acid receptor Edg-2)
Protein function Receptor for lysophosphatidic acid (LPA) (PubMed:19306925, PubMed:25025571, PubMed:26091040, PubMed:9070858). Plays a role in the reorganization of the actin cytoskeleton, cell migration, differentiation and proliferation, and thereby contribute
PDB 4Z34 , 4Z35 , 4Z36 , 7TD0 , 7TD1 , 7TD2 , 7YU3 , 7YU4 , 7YU5 , 7YU6 , 7YU7 , 7YU8 , 9IZF , 9IZG , 9IZH , 9J5V
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00001 7tm_1 66 311 7 transmembrane receptor (rhodopsin family) Family
Tissue specificity TISSUE SPECIFICITY: Expressed in many adult organs, including brain, heart, colon, small intestine, placenta, prostate, ovary, pancreas, testes, spleen, skeletal muscle, and kidney. Little or no expression in liver, lung, thymus, or peripheral blood leuko
Sequence
Sequence length 364
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Rap1 signaling pathway
Phospholipase D signaling pathway
Neuroactive ligand-receptor interaction
PI3K-Akt signaling pathway
Gap junction
Regulation of actin cytoskeleton
Pathogenic Escherichia coli infection
Pathways in cancer
  G alpha (q) signalling events
G alpha (i) signalling events
Lysosphingolipid and LPA receptors
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Colorectal Cancer Colorectal cancer N/A N/A GWAS
Lung adenocarcinoma Lung adenocarcinoma N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Adenomyosis Stimulate 29178922
Anxiety Associate 28969474
Apnea Associate 23155414
Arthritis Rheumatoid Associate 22354754
Astrocytoma Associate 33916643
Breast Neoplasms Associate 17496233, 19609003, 23405264, 31035435, 37372960, 38578146
Carcinogenesis Associate 36879212
Carcinoma Stimulate 31455351
Carcinoma Basal Cell Associate 34104083
Carcinoma Hepatocellular Stimulate 26701886