Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1892
Gene name Gene Name - the full gene name approved by the HGNC.
Enoyl-CoA hydratase, short chain 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ECHS1
Synonyms (NCBI Gene) Gene synonyms aliases
ECHS1D, SCEH, mECH, mECH1
Disease Acronyms (UniProt) Disease acronyms from UniProt database
ECHS1D
Chromosome Chromosome number
10
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
10q26.3
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene functions in the second step of the mitochondrial fatty acid beta-oxidation pathway. It catalyzes the hydration of 2-trans-enoyl-coenzyme A (CoA) intermediates to L-3-hydroxyacyl-CoAs. The gene product is a member of the h
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs144800865 T>C Likely-pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs150321966 G>A Likely-pathogenic, pathogenic-likely-pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs151006739 C>T Likely-pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs201865375 T>C Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs201966675 C>A Likely-pathogenic Coding sequence variant, non coding transcript variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT023625 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT046438 hsa-miR-15b-5p CLASH 23622248
MIRT045819 hsa-miR-152-3p CLASH 23622248
MIRT045094 hsa-miR-186-5p CLASH 23622248
MIRT951765 hsa-miR-1270 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004300 Function Enoyl-CoA hydratase activity IBA 21873635
GO:0004300 Function Enoyl-CoA hydratase activity IDA 26251176
GO:0005515 Function Protein binding IPI 14557246, 23416296, 24510904, 24947832, 31046837
GO:0005739 Component Mitochondrion IBA 21873635
GO:0005739 Component Mitochondrion IDA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602292 3151 ENSG00000127884
Protein
UniProt ID P30084
Protein name Enoyl-CoA hydratase, mitochondrial (mECH) (mECH1) (EC 4.2.1.17) (EC 5.3.3.8) (Enoyl-CoA hydratase 1) (ECHS1) (Short-chain enoyl-CoA hydratase) (SCEH)
Protein function Converts unsaturated trans-2-enoyl-CoA species ((2E)-enoyl-CoA) to the corresponding (3S)-3hydroxyacyl-CoA species through addition of a water molecule to the double bond (PubMed:25125611, PubMed:26251176). Catalyzes the hydration of medium- and
PDB 2HW5
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00378 ECH_1 42 290 Enoyl-CoA hydratase/isomerase Domain
Tissue specificity TISSUE SPECIFICITY: Liver, fibroblast, muscle. Barely detectable in spleen and kidney.
Sequence
Sequence length 290
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Fatty acid elongation
Fatty acid degradation
Valine, leucine and isoleucine degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Metabolic pathways
Carbon metabolism
Fatty acid metabolism
  Branched-chain amino acid catabolism
Beta oxidation of lauroyl-CoA to decanoyl-CoA-CoA
Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA
Beta oxidation of octanoyl-CoA to hexanoyl-CoA
Beta oxidation of hexanoyl-CoA to butanoyl-CoA
Beta oxidation of butanoyl-CoA to acetyl-CoA
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Anemia Anemia rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966
View all (89 more)
Cerebellar ataxia Progressive cerebellar ataxia rs28936415, rs199476133, rs540331226, rs797046006, rs863224069, rs138358708, rs1057519429, rs750959420, rs1568440440, rs1597846084, rs759460806, rs761486324, rs1240335250, rs1596489887
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
26938784
Developmental regression Developmental regression rs1224421127
Unknown
Disease term Disease name Evidence References Source
Ptosis Blepharoptosis, Ptosis ClinVar
Leigh Syndrome Leigh syndrome GenCC
Leigh Syndrome With Leukodystrophy Leigh syndrome with leukodystrophy GenCC
Associations from Text Mining
Disease Name Relationship Type References
Acidosis Associate 33112498, 40652483
Acidosis Lactic Associate 26081110, 32354323
Basal Ganglia Diseases Associate 26081110, 32329585, 33112498, 40652483
Beta Hydroxyisobutyryl CoA Deacylase Deficiency Associate 32329585, 33112498, 36200804
Brain Diseases Associate 32354323, 40652483
Breast Neoplasms Associate 20541551
Carcinoma Renal Cell Inhibit 31891870
Cardiomyopathies Associate 32354323
Cardiomyopathy Dilated Associate 30541556
Cerebral Palsy Associate 35076175