Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1837
Gene name Gene Name - the full gene name approved by the HGNC.
Dystrobrevin alpha
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
DTNA
Synonyms (NCBI Gene) Gene synonyms aliases
D18S892E, DRP3, DTN, DTN-A, LVNC1, MMCKR2
Disease Acronyms (UniProt) Disease acronyms from UniProt database
LVNC1, MMCKR2
Chromosome Chromosome number
18
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
18q12.1
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene belongs to the dystrobrevin subfamily of the dystrophin family. This protein is a component of the dystrophin-associated protein complex (DPC), which consists of dystrophin and several integral and peripheral membrane prot
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs104894654 C>T Pathogenic Non coding transcript variant, coding sequence variant, genic upstream transcript variant, missense variant
rs139872140 C>T Benign-likely-benign, likely-benign, conflicting-interpretations-of-pathogenicity Missense variant, intron variant, coding sequence variant, genic downstream transcript variant
rs141981161 A>G Likely-benign, conflicting-interpretations-of-pathogenicity Intron variant, coding sequence variant, missense variant, non coding transcript variant, initiator codon variant
rs147782267 A>G Conflicting-interpretations-of-pathogenicity Missense variant, genic upstream transcript variant, coding sequence variant, non coding transcript variant
rs148123045 G>A Likely-benign, conflicting-interpretations-of-pathogenicity Missense variant, intron variant, non coding transcript variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT658861 hsa-miR-8485 HITS-CLIP 23824327
MIRT736541 hsa-miR-301b-5p Luciferase reporter assay, Western blotting, qRT-PCR 32737801
MIRT658861 hsa-miR-8485 HITS-CLIP 23824327
MIRT946681 hsa-miR-2355-5p CLIP-seq
MIRT946682 hsa-miR-3065-5p CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 11353857, 19931615, 21115837
GO:0005654 Component Nucleoplasm IDA
GO:0005737 Component Cytoplasm IEA
GO:0005886 Component Plasma membrane IBA 21873635
GO:0006941 Process Striated muscle contraction TAS 10767327
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
601239 3057 ENSG00000134769
Protein
UniProt ID Q9Y4J8
Protein name Dystrobrevin alpha (DTN-A) (Alpha-dystrobrevin) (Dystrophin-related protein 3)
Protein function May be involved in the formation and stability of synapses as well as being involved in the clustering of nicotinic acetylcholine receptors.
PDB 2E5R
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF09068 EF-hand_2 16 140 EF hand Domain
PF09069 EF-hand_3 144 232 EF-hand Domain
PF00569 ZZ 238 282 Zinc finger, ZZ type Domain
Tissue specificity TISSUE SPECIFICITY: Highly expressed in brain, skeletal and cardiac muscles, and expressed at lower levels in lung, liver and pancreas. Isoform 2 is not expressed in cardiac muscle. Isoform 7 and isoform 8 are only expressed in muscle.
Sequence
MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIE
ALRENALNNLDPNTELNVSRLEAVLSTIFYQLNKRMPTTHQIHVEQSISLLLNFLLAAFD
PEGHGKISVFAVKMALATLC
GGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTA
VFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLA
NVENVFHP
VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSN
QHQMKEYTSWKSPAKKLT
NALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVDTWPPRPVTSMNDTLFSHSVPSSGSP
FITRSSPPKDSEVEQNKLLARAAPAFLKGKGIQYSLNVADRLADEHVLIGLYVNMLRNNP
SCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAELE
NKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRR
ELMVQLEGLMKLLKTQGAGSPRSSPSHTISRPIPMPIRSASACSTPTHTPQDSLTGVGGD
VQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSEVGSETESNVDSEFARTQFEDLV
PSPTSEKAFLAQIHARKPGYIHSGATTSTMRGDMVTEDADPYVQPEDENYENDSVRQLEN
ELQMEEYLKQKLQDEAYQVSLQG
Sequence length 743
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Cytoskeleton in muscle cells
Hypertrophic cardiomyopathy
Arrhythmogenic right ventricular cardiomyopathy
Dilated cardiomyopathy
Viral myocarditis
 
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Atrial fibrillation Atrial Fibrillation rs120074192, rs121908590, rs121908593, rs121434558, rs587776851, rs387906612, rs387906613, rs387906614, rs387906615, rs199472687, rs199472705, rs199473324, rs587777336, rs587777339, rs587777557
View all (6 more)
Cardiomyopathy Cardiomyopathies, Left ventricular noncompaction cardiomyopathy rs267607003, rs267607002, rs267607004, rs63750743, rs121908333, rs121908334, rs104894655, rs121434420, rs121434421, rs193922674, rs111517471, rs121908987, rs193922384, rs121909374, rs121909377
View all (900 more)
Hypoplastic left heart syndrome Hypoplastic Left Heart Syndrome rs1554284604, rs1843006535
Left ventricular hypertrophy Left Ventricular Hypertrophy rs397516037
Unknown
Disease term Disease name Evidence References Source
Congestive heart failure Congestive heart failure ClinVar
Myopathy dilated cardiomyopathy GenCC
Meniere Disease Meniere disease GenCC
Congenital Heart Disease congenital heart disease GenCC
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 30120299
Atrial Fibrillation Associate 35148685
Cardiomyopathies Associate 33895855
Cardiomyopathy Dilated with Left Ventricular Noncompaction Associate 35148685
Colonic Neoplasms Associate 28714374
Colorectal Neoplasms Associate 38466182
Death Sudden Associate 33895855
Dementia Associate 30120299
Genetic Diseases Inborn Associate 29241933
Megalencephalic leukoencephalopathy with subcortical cysts Associate 30120299