Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
170691
Gene name Gene Name - the full gene name approved by the HGNC.
ADAM metallopeptidase with thrombospondin type 1 motif 17
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ADAMTS17
Synonyms (NCBI Gene) Gene synonyms aliases
WMS4
Disease Acronyms (UniProt) Disease acronyms from UniProt database
WMS4
Chromosome Chromosome number
15
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
15q26.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) protein family. ADAMTS family members share several distinct protein modules, including a propeptide region, a metalloproteinase domain, a disintegri
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs11277519 GGCTTG>-,GGCTTGGGCTTG Conflicting-interpretations-of-pathogenicity 3 prime UTR variant, genic downstream transcript variant
rs267606638 G>A Pathogenic Coding sequence variant, non coding transcript variant, genic upstream transcript variant, stop gained
rs387906291 ->C Pathogenic Coding sequence variant, genic downstream transcript variant, splice acceptor variant
rs749116256 C>T Pathogenic Splice donor variant, intron variant
rs1160509052 C>A,T Pathogenic Splice donor variant, genic upstream transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT025745 hsa-miR-7-5p Microarray 17612493
MIRT714860 hsa-miR-543 HITS-CLIP 19536157
MIRT714853 hsa-miR-432-5p HITS-CLIP 19536157
MIRT714859 hsa-miR-3621 HITS-CLIP 19536157
MIRT714858 hsa-miR-3656 HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004222 Function Metalloendopeptidase activity IBA 21873635
GO:0006508 Process Proteolysis IEA
GO:0030198 Process Extracellular matrix organization IBA 21873635
GO:0031012 Component Extracellular matrix IBA 21873635
GO:0046872 Function Metal ion binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
607511 17109 ENSG00000140470
Protein
UniProt ID Q8TE56
Protein name A disintegrin and metalloproteinase with thrombospondin motifs 17 (ADAM-TS 17) (ADAM-TS17) (ADAMTS-17) (EC 3.4.24.-)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01562 Pep_M12B_propep 36 180 Reprolysin family propeptide Family
PF01421 Reprolysin 338 452 Reprolysin (M12B) family zinc metalloprotease Domain
PF17771 ADAM_CR_2 466 533 ADAM cysteine-rich domain Domain
PF00090 TSP_1 547 597 Thrombospondin type 1 domain Domain
PF05986 ADAM_spacer1 707 783 ADAM-TS Spacer 1 Family
PF19030 TSP1_ADAMTS 804 861 Domain
PF19030 TSP1_ADAMTS 865 921 Domain
PF19030 TSP1_ADAMTS 925 973 Domain
PF19030 TSP1_ADAMTS 976 1028 Domain
Tissue specificity TISSUE SPECIFICITY: Isoform 1 and isoform 2 are expressed at high levels in the lung, brain, whole eye and retina. Isoform 1 shows a weaker expression in the heart, kidney and skeletal muscle. Isoform 2 shows a weaker expression in the kidney, bone marrow
Sequence
MCDGALLPPLVLPVLLLLVWGLDPGTAVGDAAADVEVVLPWRVRPDDVHLPPLPAAPGPR
RRRRPRTPPAAPRARPGERALLLHLPAFGRDLYLQLRRDLRFLSRGFEVEEAGAARRRGR
PAELCFYSGRVLGHPGSLVSLSACGAAGGLVGLIQLGQEQVLIQPLNNSQGPFSGREHLI

RRKWSLTPSPSAEAQRPEQLCKVLTEKKKPTWGRPSRDWRERRNAIRLTSEHTVETLVVA
DADMVQYHGAEAAQRFILTVMNMVYNMFQHQSLGIKINIQVTKLVLLRQRPAKLSIGHHG
ERSLESFCHWQNEEYGGARYLGNNQVPGGKDDPPLVDAAVFVTRTDFCVHKDEPCDTVGI
AYLGGVCSAKRKCVLAEDNGLNLAFTIAHELGHNLGMNHDDDHSSCAGRSHIMSGEWVKG
RNPSDLSWSSCSRDDLENFLKSKVSTCLLVTD
PRSQHTVRLPHKLPGMHYSANEQCQILF
GMNATFCRNMEHLMCAGLWCLVEGDTSCKTKLDPPLDGTECGADKWCRAGECV
SKTPIPE
HVDGDWSPWGAWSMCSRTCGTGARFRQRKCDNPPPGPGGTHCPGASVEHAVCENLPCPKG
LPSFRDQQCQAHDRLSPKKKGLLTAVVVDDKPCELYCSPLGKESPLLVADRVLDGTPCGP
YETDLCVHGKCQKIGCDGIIGSAAKEDRCGVCSGDGKTCHLVKGDFSHARGTALKDSGKG
SINSDWKIELPGEFQIAGTTVRYVRRGLWEKISAKGPTKLPLHLMVLLFHDQDYGIHYEY
TVP
VNRTAENQSEPEKPQDSLFIWTHSGWEGCSVQCGGGERRTIVSCTRIVNKTTTLVND
SDCPQASRPEPQVRRCNLHPC
QSRWVAGPWSPCSATCEKGFQHREVTCVYQLQNGTHVAT
RPLYCPGPRPAAVQSCEGQDC
LSIWEASEWSQCSASCGKGVWKRTVACTNSQGKCDASTR
PRAEEACEDYSGC
YEWKTGDWSTCSSTCGKGLQSRVVQCMHKVTGRHGSECPALSKPAPY
RQCYQEVC
NDRINANTITSPRLAALTYKCTRDQWTVYCRVIREKNLCQDMRWYQRCCQTC
RDFYANKMRQPPPNS
Sequence length 1095
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Carpal tunnel syndrome Carpal Tunnel Syndrome rs28936368, rs121918088 30833571
Ectopia lentis Ectopia Lentis rs118203985, rs137854464, rs137854480, rs587776927, rs199473693, rs794726688, rs368482584, rs794726689, rs747160538, rs397514558, rs397515793, rs757318536, rs781691587, rs363806
Glaucoma Glaucoma rs121918355, rs1566660365, rs1566635134, rs121918356, rs1566634475, rs28936700, rs55771538, rs28936701, rs104893622, rs55989760, rs72549387, rs104893628, rs2125316417, rs104893629, rs74315328
View all (29 more)
Myopia Myopia rs387907109, rs146936371, rs587776903, rs786205127, rs398122836, rs199624584, rs587777625, rs786205216, rs758872875, rs764211125, rs1135402746, rs765658563, rs1555941129, rs1555941116, rs199923805
View all (6 more)
Unknown
Disease term Disease name Evidence References Source
Weill-Marchesani Syndrome Weill-Marchesani 4 syndrome, recessive GenCC
Gastroesophageal Reflux Disease Gastroesophageal Reflux Disease GWAS
Osteosarcoma Osteosarcoma Collectively, our study identifies Rad18 as a driver of OS doxorubicin resistance that promotes the HR pathway and indicates that targeting Rad18 is an effective approach to overcome chemotherapy resistance in OS. GWAS, CBGDA
Carpal Tunnel Syndrome Carpal Tunnel Syndrome GWAS
Associations from Text Mining
Disease Name Relationship Type References
Axenfeld Rieger syndrome Associate 32499604
Brachydactyly Associate 32616716
Carcinoma Squamous Cell Associate 32596344
Carpal Tunnel Syndrome Associate 30833571
Colitis Ulcerative Associate 37481583
Crohn Disease Associate 37481583
Dwarfism stiff joint ocular abnormalities Associate 32616716
Ectopia Lentis Associate 19836009
Glaucoma Associate 19836009
Growth Disorders Associate 19836009