Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
162
Gene name Gene Name - the full gene name approved by the HGNC.
Adaptor related protein complex 1 subunit beta 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
AP1B1
Synonyms (NCBI Gene) Gene synonyms aliases
ADTB1, AP105A, BAM22, CLAPB2, KIDAR
Disease Acronyms (UniProt) Disease acronyms from UniProt database
KIDAR
Chromosome Chromosome number
22
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
22q12.2
Summary Summary of gene provided in NCBI Entrez Gene.
Adaptor protein complex 1 is found at the cytoplasmic face of coated vesicles located at the Golgi complex, where it mediates both the recruitment of clathrin to the membrane and the recognition of sorting signals within the cytosolic tails of transmembra
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs780548317 C>A Pathogenic Coding sequence variant, stop gained
rs1602683532 G>- Pathogenic Coding sequence variant, frameshift variant
rs1602749299 A>G Pathogenic Missense variant, coding sequence variant
rs1602761438 C>T Pathogenic Intron variant, splice acceptor variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT023555 hsa-miR-1-3p Proteomics 18668040
MIRT023555 hsa-miR-1-3p Microarray 18668037
MIRT046805 hsa-miR-222-3p CLASH 23622248
MIRT041898 hsa-miR-484 CLASH 23622248
MIRT040921 hsa-miR-18a-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane TAS
GO:0001822 Process Kidney development IEA
GO:0005515 Function Protein binding IPI 9733768, 23415225, 24843023
GO:0005765 Component Lysosomal membrane TAS
GO:0005794 Component Golgi apparatus IDA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
600157 554 ENSG00000100280
Protein
UniProt ID Q10567
Protein name AP-1 complex subunit beta-1 (Adaptor protein complex AP-1 subunit beta-1) (Adaptor-related protein complex 1 subunit beta-1) (Beta-1-adaptin) (Beta-adaptin 1) (Clathrin assembly protein complex 1 beta large chain) (Golgi adaptor HA1/AP1 adaptin beta subun
Protein function Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes (PubMed:31630791). The AP complexes mediate both the recruitment of clathrin to membranes
PDB 4HMY , 4P6Z , 6CM9 , 6CRI , 6D83 , 6D84 , 6DFF , 7R4H , 7UX3 , 8D4C , 8D4D , 8D4E , 8D4F , 8D4G , 8D9R , 8D9S , 8D9T , 8D9U , 8D9V , 8D9W
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01602 Adaptin_N 10 534 Adaptin N terminal region Family
PF02883 Alpha_adaptinC2 720 826 Adaptin C-terminal domain Domain
PF09066 B2-adapt-app_C 836 947 Beta2-adaptin appendage, C-terminal sub-domain Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed.
Sequence
MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK
YPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDP
VAAKEV
VLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPSAFVEGGRGVVHKSLPPRTASS
ESAESPETAPTGAPPGEQPDVIPAQGDLLGDLLNLDLGPPVSGPPLATSSVQMGAVDLLG
GGLDSLMGDEPEGIGGTNFVAPPTAAVPANLGAPIGSGLSDLFDLTSGVGTLSGSYVAPK
AVWLPAMKAKGLEISGTFTRQVGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPATPLQ
VHAPLSPNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNIDVFYFS
TLYPLHILFVEDGK
MDRQMFLATWKDIPNENEAQFQIRDCPLNAEAASSKLQSSNIFTVAKRNVEGQDMLYQSL
KLTNGIWVLAELRIQPGNPSCTDLELSLKCRAPEVSQHVYQAYETIL
KN
Sequence length 949
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Lysosome
Human immunodeficiency virus 1 infection
  Nef mediated downregulation of MHC class I complex cell surface expression
MHC class II antigen presentation
Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
31630791
Mednik syndrome MEDNIK syndrome rs751430853, rs767358930, rs981747624, rs1584203922, rs1310110289
Mental retardation Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
31630791
Unknown
Disease term Disease name Evidence References Source
MEDNIK Syndrome MEDNIK syndrome GenCC
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Stimulate 39838438
Autoimmune enteropathy Associate 40101690
Charcot Marie Tooth disease Type 1D Stimulate 39838438
Copper deficiency familial benign Associate 40101690
Deafness Associate 31630788, 40101690
Erythrokeratodermia Variabilis 3 Associate 31630791
Failure to Thrive Associate 31630788
Gout Associate 39838438
Hearing Loss Associate 31630788
Hypersensitivity Delayed Associate 40101690