SCFD2 (sec1 family domain containing 2)

Gene

• Entrez ID: 152579
• Gene name: Sec1 family domain containing 2
• Gene symbol: SCFD2
• Synonyms (NCBI Gene): STXBP1L1
• Chromosome: 4
• Chromosome location: 4q12

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT1329307	hsa-miR-4778-3p	CLIP-seq
MIRT2321886	hsa-miR-3120-3p	CLIP-seq
MIRT2618305	hsa-miR-122	CLIP-seq
MIRT2618306	hsa-miR-3198	CLIP-seq
MIRT2618307	hsa-miR-323b-5p	CLIP-seq
MIRT2618308	hsa-miR-4309	CLIP-seq
MIRT2618309	hsa-miR-4752	CLIP-seq
MIRT2618310	hsa-miR-496	CLIP-seq
MIRT2618311	hsa-miR-548ae	CLIP-seq
MIRT2618312	hsa-miR-548aj	CLIP-seq
MIRT2618313	hsa-miR-548am	CLIP-seq
MIRT2618314	hsa-miR-548x	CLIP-seq
MIRT2618315	hsa-miR-765	CLIP-seq
MIRT2618316	hsa-miR-873	CLIP-seq
MIRT2618305	hsa-miR-122	CLIP-seq
MIRT2618306	hsa-miR-3198	CLIP-seq
MIRT2618307	hsa-miR-323b-5p	CLIP-seq
MIRT2618308	hsa-miR-4309	CLIP-seq
MIRT2618309	hsa-miR-4752	CLIP-seq
MIRT2618310	hsa-miR-496	CLIP-seq
MIRT2618315	hsa-miR-765	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0006886	Process	Intracellular protein transport	IBA
GO:0015031	Process	Protein transport	IEA
GO:0016192	Process	Vesicle-mediated transport	IBA
GO:0016192	Process	Vesicle-mediated transport	IEA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q8WU76
• Protein name: Sec1 family domain-containing protein 2 (Syntaxin-binding protein 1-like 1)
• Protein function: May be involved in protein transport.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00995	Sec1	316 → 668	Sec1 family	Family

• Sequence:

  MSASGVLSFTQQGWEQVLAKVKRAVVYLDAACAESLHWGCGSTRLLEAVGGPDCHLREFE
  PDAIGGGAKQPKAVFVLSCLLKGRTVEILRDIICRSHFQYCVVVTTVSHAVHLTANHVPA
  AAAAEMEGQQPVFEQLEEKLCEWMGNMNYTAEVFHVPLLLAPVAPHFALTPAFASLFPLL
  PQDVHLLNSARPDKRKLGSLGDVDSTTLTPELLLQIRCLVSGLSSLCEHLGVREECFAVG
  SLSQVIAADLANYAPAKNRKKTAAGRASVVFVDRTLDLTGAVGHHGDNLVEKIISALPQL
  PGHTNDVMVNMIALTALHTEEENYNVVAPGCLSQSSDTTAKALWEALLNTKHKEAVMEVR
  RHLVEAASRENLPIKMSMGRVTPGQLMSYIQLFKNNLKALMNHCGLLQLGLATAQTLKHP
  QTAKWDNFLAFERLLLQSIGESAMSVVLNQLLPMIKPVTQRTNEDYSPEELLILLIYIYS
  VTGELTVDKDLCEAEEKVKKALAQVFCEESGLSPLLQKITDWDSSINLTFHKSKIAVDEL
  FTSLRDIAGARSLLKQFKSVYVPGNHTHQASYKPLLKQVVEEIFHPERPDSVDIEHMSSG
  LTDLLKTGFSMFMKVSRPHPSDYPLLILFVVGGVTVSEVKMVKDLVASLKPGTQVIVLST
  RLLKPLNIPELLFATDRLHPDLGF

• Sequence length: 684

Associated diseases

Causal
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Autism, susceptiblity to	Likely pathogenic	rs192499281	RCV003313024

Associations from Text Mining
Disease Name	Relationship Type	References
Breast Neoplasms	Associate	35681031