Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	1290
Gene name Gene Name - the full gene name approved by the HGNC.	Collagen type V alpha 2 chain
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	COL5A2
Synonyms (NCBI Gene) Gene synonyms aliases	EDSC, EDSCL2
Disease Acronyms (UniProt) Disease acronyms from UniProt database	EDSCL2
Chromosome Chromosome number	2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	2q32.2
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes an alpha chain for one of the low abundance fibrillar collagens. Fibrillar collagen molecules are trimers that can be composed of one or more types of alpha chains. Type V collagen is found in tissues containing type I collagen and appea

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SNP ID	Visualize variation	Clinical significance	Consequence
rs121912930	C>G	Pathogenic	Coding sequence variant, missense variant
rs139189200	G>A	Conflicting-interpretations-of-pathogenicity, likely-benign	Coding sequence variant, missense variant
rs139656817	A>G	Conflicting-interpretations-of-pathogenicity, likely-benign	Coding sequence variant, synonymous variant
rs140609193	T>G	Conflicting-interpretations-of-pathogenicity, likely-benign	Coding sequence variant, synonymous variant
rs140952583	T>C	Conflicting-interpretations-of-pathogenicity, likely-benign	Coding sequence variant, missense variant
rs145258293	G>A	Conflicting-interpretations-of-pathogenicity	Missense variant, coding sequence variant
rs145404046	G>A	Likely-benign, conflicting-interpretations-of-pathogenicity, uncertain-significance	Missense variant, coding sequence variant
rs147420365	C>T	Likely-benign, conflicting-interpretations-of-pathogenicity	Missense variant, coding sequence variant
rs151187317	C>T	Uncertain-significance, likely-pathogenic	Missense variant, coding sequence variant
rs199530997	G>A,T	Uncertain-significance, conflicting-interpretations-of-pathogenicity	Coding sequence variant, missense variant
rs367643805	T>A,C	Benign-likely-benign, likely-benign, uncertain-significance, conflicting-interpretations-of-pathogenicity	Intron variant
rs369733690	A>G	Conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance	Intron variant
rs372227642	A>G	Benign-likely-benign, likely-benign, conflicting-interpretations-of-pathogenicity, uncertain-significance	Intron variant
rs376612765	G>A	Likely-benign, conflicting-interpretations-of-pathogenicity	Coding sequence variant, synonymous variant
rs549894501	T>C	Uncertain-significance, likely-benign, benign-likely-benign, conflicting-interpretations-of-pathogenicity	Intron variant, synonymous variant, coding sequence variant
rs562950263	C>A,T	Conflicting-interpretations-of-pathogenicity	Missense variant, coding sequence variant
rs563606558	T>C	Likely-pathogenic, uncertain-significance	Missense variant, intron variant, initiator codon variant
rs747946828	C>A,T	Likely-pathogenic, uncertain-significance	Missense variant, coding sequence variant
rs770598613	C>G	Likely-pathogenic	Splice donor variant
rs770974455	C>A,T	Likely-pathogenic	Coding sequence variant, missense variant
rs786205103	GCTCCCT>-	Pathogenic	Splice acceptor variant, coding sequence variant
rs786205104	C>A	Pathogenic	Splice donor variant
rs863223491	C>T	Conflicting-interpretations-of-pathogenicity	Coding sequence variant, synonymous variant
rs863223501	C>T	Likely-pathogenic	Coding sequence variant, missense variant
rs878853978	C>T	Likely-pathogenic	Coding sequence variant, synonymous variant
rs886039694	C>T	Pathogenic, uncertain-significance	Coding sequence variant, missense variant
rs1040238147	C>T	Likely-pathogenic, uncertain-significance	Missense variant, coding sequence variant
rs1057524163	C>A	Likely-pathogenic	Missense variant, coding sequence variant
rs1553512393	A>-	Pathogenic	Frameshift variant, coding sequence variant
rs1553513657	C>T	Likely-pathogenic	Splice donor variant
rs1553513971	T>C	Pathogenic	Splice acceptor variant
rs1553514506	A>-	Pathogenic	Splice donor variant
rs1553514799	C>T	Likely-pathogenic	Intron variant
rs1553515517	T>C	Pathogenic	Intron variant
rs1553515794	C>T	Likely-pathogenic	Coding sequence variant, synonymous variant
rs1553517181	C>T	Likely-pathogenic	Coding sequence variant, missense variant
rs1553517323	C>A	Likely-pathogenic	Coding sequence variant, missense variant
rs1559085564	C>T	Likely-pathogenic	Coding sequence variant, missense variant
rs1559085578	G>C	Pathogenic	Intron variant
rs1559104199	C>A	Likely-pathogenic	Splice donor variant
rs1576502045	C>T	Likely-pathogenic	Splice donor variant
rs1576517517	C>A	Pathogenic	Intron variant

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miRTarBase ID	miRNA	Experiments	Reference
MIRT030666	hsa-miR-21-5p	Microarray	18591254
MIRT046753	hsa-miR-222-3p	CLASH	23622248
MIRT053646	hsa-miR-143-3p	Microarray	22942087
MIRT437545	hsa-miR-29a-3p	Luciferase reporter assay	22745231
MIRT437552	hsa-miR-29b-3p	Luciferase reporter assay	22745231
MIRT437558	hsa-miR-29c-3p	Luciferase reporter assay	22745231
MIRT437566	hsa-miR-767-5p	Luciferase reporter assay	22745231
MIRT437552	hsa-miR-29b-3p	qRT-PCR	25744716
MIRT437552	hsa-miR-29b-3p	qRT-PCR	25744716
MIRT734990	hsa-let-7e-3p	qRT-PCR	33066614
MIRT756330	hsa-miR-1286	Luciferase reporter assay, Western blotting, qRT-PCR	34766472
MIRT903060	hsa-miR-1323	CLIP-seq
MIRT903061	hsa-miR-135a	CLIP-seq
MIRT903062	hsa-miR-135b	CLIP-seq
MIRT903063	hsa-miR-2276	CLIP-seq
MIRT903064	hsa-miR-2682	CLIP-seq
MIRT903065	hsa-miR-297	CLIP-seq
MIRT903066	hsa-miR-3122	CLIP-seq
MIRT903067	hsa-miR-3147	CLIP-seq
MIRT903068	hsa-miR-3149	CLIP-seq
MIRT903069	hsa-miR-323-5p	CLIP-seq
MIRT903070	hsa-miR-342-3p	CLIP-seq
MIRT903071	hsa-miR-34a	CLIP-seq
MIRT903072	hsa-miR-34c-5p	CLIP-seq
MIRT903073	hsa-miR-377	CLIP-seq
MIRT903074	hsa-miR-3913-5p	CLIP-seq
MIRT903075	hsa-miR-409-3p	CLIP-seq
MIRT903076	hsa-miR-4423-5p	CLIP-seq
MIRT903077	hsa-miR-4425	CLIP-seq
MIRT903078	hsa-miR-4477b	CLIP-seq
MIRT903079	hsa-miR-449a	CLIP-seq
MIRT903080	hsa-miR-449b	CLIP-seq
MIRT903081	hsa-miR-449c	CLIP-seq
MIRT903082	hsa-miR-450b-3p	CLIP-seq
MIRT903083	hsa-miR-4511	CLIP-seq
MIRT903084	hsa-miR-4639-5p	CLIP-seq
MIRT903085	hsa-miR-4643	CLIP-seq
MIRT903086	hsa-miR-4668-3p	CLIP-seq
MIRT903087	hsa-miR-4712-3p	CLIP-seq
MIRT903088	hsa-miR-4719	CLIP-seq
MIRT903089	hsa-miR-4772-3p	CLIP-seq
MIRT903090	hsa-miR-4781-3p	CLIP-seq
MIRT903091	hsa-miR-511	CLIP-seq
MIRT903092	hsa-miR-518a-5p	CLIP-seq
MIRT903093	hsa-miR-527	CLIP-seq
MIRT903094	hsa-miR-544	CLIP-seq
MIRT903095	hsa-miR-548b-3p	CLIP-seq
MIRT903096	hsa-miR-548o	CLIP-seq
MIRT903097	hsa-miR-586	CLIP-seq
MIRT903098	hsa-miR-590-3p	CLIP-seq
MIRT903099	hsa-miR-769-3p	CLIP-seq
MIRT1547214	hsa-miR-1245	CLIP-seq
MIRT1547215	hsa-miR-1266	CLIP-seq
MIRT756330	hsa-miR-1286	CLIP-seq
MIRT1547216	hsa-miR-132	CLIP-seq
MIRT1547217	hsa-miR-208a	CLIP-seq
MIRT1547218	hsa-miR-208b	CLIP-seq
MIRT1547219	hsa-miR-212	CLIP-seq
MIRT1547220	hsa-miR-29a	CLIP-seq
MIRT1547221	hsa-miR-29b	CLIP-seq
MIRT1547222	hsa-miR-29c	CLIP-seq
MIRT1547223	hsa-miR-300	CLIP-seq
MIRT1547224	hsa-miR-3148	CLIP-seq
MIRT1547225	hsa-miR-3157-5p	CLIP-seq
MIRT1547226	hsa-miR-3173-3p	CLIP-seq
MIRT1547227	hsa-miR-335	CLIP-seq
MIRT1547228	hsa-miR-3664-3p	CLIP-seq
MIRT1547229	hsa-miR-3667-5p	CLIP-seq
MIRT1547230	hsa-miR-3673	CLIP-seq
MIRT1547231	hsa-miR-3682-5p	CLIP-seq
MIRT1547232	hsa-miR-381	CLIP-seq
MIRT1547233	hsa-miR-4269	CLIP-seq
MIRT1547234	hsa-miR-4307	CLIP-seq
MIRT1547235	hsa-miR-432	CLIP-seq
MIRT1547236	hsa-miR-4428	CLIP-seq
MIRT1547237	hsa-miR-4518	CLIP-seq
MIRT1547238	hsa-miR-4645-5p	CLIP-seq
MIRT1547239	hsa-miR-4666-3p	CLIP-seq
MIRT1547240	hsa-miR-4673	CLIP-seq
MIRT1547241	hsa-miR-4681	CLIP-seq
MIRT1547242	hsa-miR-4691-3p	CLIP-seq
MIRT1547243	hsa-miR-4695-5p	CLIP-seq
MIRT1547244	hsa-miR-4722-5p	CLIP-seq
MIRT1547245	hsa-miR-4728-3p	CLIP-seq
MIRT1547246	hsa-miR-4755-3p	CLIP-seq
MIRT1547247	hsa-miR-499-5p	CLIP-seq
MIRT1547248	hsa-miR-5096	CLIP-seq
MIRT1547249	hsa-miR-513b	CLIP-seq
MIRT903098	hsa-miR-590-3p	CLIP-seq
MIRT1547250	hsa-miR-885-5p	CLIP-seq
MIRT1547216	hsa-miR-132	CLIP-seq
MIRT1547219	hsa-miR-212	CLIP-seq
MIRT1556193	hsa-miR-3942-3p	CLIP-seq
MIRT1547234	hsa-miR-4307	CLIP-seq
MIRT1547241	hsa-miR-4681	CLIP-seq
MIRT1967776	hsa-miR-1257	CLIP-seq
MIRT1547215	hsa-miR-1266	CLIP-seq
MIRT903061	hsa-miR-135a	CLIP-seq
MIRT903062	hsa-miR-135b	CLIP-seq
MIRT903065	hsa-miR-297	CLIP-seq
MIRT903066	hsa-miR-3122	CLIP-seq
MIRT903068	hsa-miR-3149	CLIP-seq
MIRT903069	hsa-miR-323-5p	CLIP-seq
MIRT1547227	hsa-miR-335	CLIP-seq
MIRT1967777	hsa-miR-3611	CLIP-seq
MIRT1547228	hsa-miR-3664-3p	CLIP-seq
MIRT1967778	hsa-miR-3907	CLIP-seq
MIRT903074	hsa-miR-3913-5p	CLIP-seq
MIRT1967779	hsa-miR-4289	CLIP-seq
MIRT1547237	hsa-miR-4518	CLIP-seq
MIRT1967780	hsa-miR-4790-3p	CLIP-seq
MIRT903091	hsa-miR-511	CLIP-seq
MIRT903097	hsa-miR-586	CLIP-seq
MIRT1967781	hsa-miR-616	CLIP-seq
MIRT1967782	hsa-miR-876-3p	CLIP-seq
MIRT2203612	hsa-miR-1272	CLIP-seq
MIRT756330	hsa-miR-1286	CLIP-seq
MIRT1547217	hsa-miR-208a	CLIP-seq
MIRT1547218	hsa-miR-208b	CLIP-seq
MIRT1547220	hsa-miR-29a	CLIP-seq
MIRT1547221	hsa-miR-29b	CLIP-seq
MIRT1547222	hsa-miR-29c	CLIP-seq
MIRT1547226	hsa-miR-3173-3p	CLIP-seq
MIRT1547229	hsa-miR-3667-5p	CLIP-seq
MIRT1547233	hsa-miR-4269	CLIP-seq
MIRT1547236	hsa-miR-4428	CLIP-seq
MIRT2203613	hsa-miR-4528	CLIP-seq
MIRT1547238	hsa-miR-4645-5p	CLIP-seq
MIRT2203614	hsa-miR-4659a-3p	CLIP-seq
MIRT2203615	hsa-miR-4659b-3p	CLIP-seq
MIRT1547240	hsa-miR-4673	CLIP-seq
MIRT1547243	hsa-miR-4695-5p	CLIP-seq
MIRT1547244	hsa-miR-4722-5p	CLIP-seq
MIRT1547246	hsa-miR-4755-3p	CLIP-seq
MIRT2203616	hsa-miR-4777-5p	CLIP-seq
MIRT1547247	hsa-miR-499-5p	CLIP-seq
MIRT2203617	hsa-miR-518d-5p	CLIP-seq
MIRT2203618	hsa-miR-519b-5p	CLIP-seq
MIRT2203619	hsa-miR-519c-5p	CLIP-seq
MIRT2203620	hsa-miR-520c-5p	CLIP-seq
MIRT2203621	hsa-miR-526a	CLIP-seq
MIRT2203622	hsa-miR-548c-3p	CLIP-seq
MIRT2427677	hsa-let-7a	CLIP-seq
MIRT2427678	hsa-let-7b	CLIP-seq
MIRT2427679	hsa-let-7c	CLIP-seq
MIRT2427680	hsa-let-7d	CLIP-seq
MIRT2427681	hsa-let-7e	CLIP-seq
MIRT2427682	hsa-let-7f	CLIP-seq
MIRT2427683	hsa-let-7g	CLIP-seq
MIRT2427684	hsa-let-7i	CLIP-seq
MIRT2427685	hsa-miR-1	CLIP-seq
MIRT2427686	hsa-miR-101	CLIP-seq
MIRT2427687	hsa-miR-105	CLIP-seq
MIRT2427688	hsa-miR-1179	CLIP-seq
MIRT2427689	hsa-miR-1184	CLIP-seq
MIRT2427690	hsa-miR-1193	CLIP-seq
MIRT1547214	hsa-miR-1245	CLIP-seq
MIRT2427691	hsa-miR-1252	CLIP-seq
MIRT1967776	hsa-miR-1257	CLIP-seq
MIRT1547215	hsa-miR-1266	CLIP-seq
MIRT756330	hsa-miR-1286	CLIP-seq
MIRT2427692	hsa-miR-129-3p	CLIP-seq
MIRT2427693	hsa-miR-1303	CLIP-seq
MIRT2427694	hsa-miR-1305	CLIP-seq
MIRT1547216	hsa-miR-132	CLIP-seq
MIRT903061	hsa-miR-135a	CLIP-seq
MIRT903062	hsa-miR-135b	CLIP-seq
MIRT2427695	hsa-miR-143	CLIP-seq
MIRT2427696	hsa-miR-144	CLIP-seq
MIRT2427697	hsa-miR-202	CLIP-seq
MIRT2427698	hsa-miR-206	CLIP-seq
MIRT1547217	hsa-miR-208a	CLIP-seq
MIRT1547218	hsa-miR-208b	CLIP-seq
MIRT1547219	hsa-miR-212	CLIP-seq
MIRT903063	hsa-miR-2276	CLIP-seq
MIRT2427699	hsa-miR-23a	CLIP-seq
MIRT2427700	hsa-miR-23b	CLIP-seq
MIRT2427701	hsa-miR-23c	CLIP-seq
MIRT2427702	hsa-miR-2467-3p	CLIP-seq
MIRT903065	hsa-miR-297	CLIP-seq
MIRT1547220	hsa-miR-29a	CLIP-seq
MIRT1547221	hsa-miR-29b	CLIP-seq
MIRT1547222	hsa-miR-29c	CLIP-seq
MIRT1547223	hsa-miR-300	CLIP-seq
MIRT2427703	hsa-miR-3065-5p	CLIP-seq
MIRT2427704	hsa-miR-3121-3p	CLIP-seq
MIRT903066	hsa-miR-3122	CLIP-seq
MIRT2427705	hsa-miR-3125	CLIP-seq
MIRT903067	hsa-miR-3147	CLIP-seq
MIRT1547224	hsa-miR-3148	CLIP-seq
MIRT903068	hsa-miR-3149	CLIP-seq
MIRT1547225	hsa-miR-3157-5p	CLIP-seq
MIRT2427706	hsa-miR-3168	CLIP-seq
MIRT1547226	hsa-miR-3173-3p	CLIP-seq
MIRT2427707	hsa-miR-3173-5p	CLIP-seq
MIRT2427708	hsa-miR-3180-5p	CLIP-seq
MIRT2427709	hsa-miR-3185	CLIP-seq
MIRT2427710	hsa-miR-3189-3p	CLIP-seq
MIRT2427711	hsa-miR-3190	CLIP-seq
MIRT903069	hsa-miR-323-5p	CLIP-seq
MIRT2427712	hsa-miR-330-3p	CLIP-seq
MIRT1547227	hsa-miR-335	CLIP-seq
MIRT2427713	hsa-miR-337-3p	CLIP-seq
MIRT2427714	hsa-miR-33a	CLIP-seq
MIRT2427715	hsa-miR-33b	CLIP-seq
MIRT1967777	hsa-miR-3611	CLIP-seq
MIRT2427716	hsa-miR-3613-5p	CLIP-seq
MIRT2427717	hsa-miR-3649	CLIP-seq
MIRT2427718	hsa-miR-3653	CLIP-seq
MIRT2427719	hsa-miR-3658	CLIP-seq
MIRT2427720	hsa-miR-3663-5p	CLIP-seq
MIRT1547228	hsa-miR-3664-3p	CLIP-seq
MIRT1547229	hsa-miR-3667-5p	CLIP-seq
MIRT1547230	hsa-miR-3673	CLIP-seq
MIRT2427721	hsa-miR-3678-3p	CLIP-seq
MIRT1547231	hsa-miR-3682-5p	CLIP-seq
MIRT2427722	hsa-miR-3685	CLIP-seq
MIRT2427723	hsa-miR-369-3p	CLIP-seq
MIRT1547232	hsa-miR-381	CLIP-seq
MIRT2427724	hsa-miR-382	CLIP-seq
MIRT2427725	hsa-miR-384	CLIP-seq
MIRT903074	hsa-miR-3913-5p	CLIP-seq
MIRT2427726	hsa-miR-3916	CLIP-seq
MIRT2427727	hsa-miR-3925-3p	CLIP-seq
MIRT2427728	hsa-miR-3926	CLIP-seq
MIRT2427729	hsa-miR-3928	CLIP-seq
MIRT1556193	hsa-miR-3942-3p	CLIP-seq
MIRT2427730	hsa-miR-3973	CLIP-seq
MIRT903075	hsa-miR-409-3p	CLIP-seq
MIRT2427731	hsa-miR-425	CLIP-seq
MIRT1547233	hsa-miR-4269	CLIP-seq
MIRT2427732	hsa-miR-4272	CLIP-seq
MIRT2427733	hsa-miR-4275	CLIP-seq
MIRT2427734	hsa-miR-4281	CLIP-seq
MIRT1967779	hsa-miR-4289	CLIP-seq
MIRT1547234	hsa-miR-4307	CLIP-seq
MIRT1547235	hsa-miR-432	CLIP-seq
MIRT2427735	hsa-miR-4328	CLIP-seq
MIRT2427736	hsa-miR-4418	CLIP-seq
MIRT2427737	hsa-miR-4422	CLIP-seq
MIRT903077	hsa-miR-4425	CLIP-seq
MIRT1547236	hsa-miR-4428	CLIP-seq
MIRT2427738	hsa-miR-4458	CLIP-seq
MIRT2427739	hsa-miR-4474-3p	CLIP-seq
MIRT2427740	hsa-miR-4476	CLIP-seq
MIRT903078	hsa-miR-4477b	CLIP-seq
MIRT2427741	hsa-miR-4491	CLIP-seq
MIRT2427742	hsa-miR-4500	CLIP-seq
MIRT903082	hsa-miR-450b-3p	CLIP-seq
MIRT2427743	hsa-miR-450b-5p	CLIP-seq
MIRT1547237	hsa-miR-4518	CLIP-seq
MIRT2427744	hsa-miR-4520a-3p	CLIP-seq
MIRT2427745	hsa-miR-4520b-3p	CLIP-seq
MIRT2203613	hsa-miR-4528	CLIP-seq
MIRT903084	hsa-miR-4639-5p	CLIP-seq
MIRT1547238	hsa-miR-4645-5p	CLIP-seq
MIRT2427746	hsa-miR-4657	CLIP-seq
MIRT2203614	hsa-miR-4659a-3p	CLIP-seq
MIRT2203615	hsa-miR-4659b-3p	CLIP-seq
MIRT1547239	hsa-miR-4666-3p	CLIP-seq
MIRT2427747	hsa-miR-4666-5p	CLIP-seq
MIRT903086	hsa-miR-4668-3p	CLIP-seq
MIRT1547240	hsa-miR-4673	CLIP-seq
MIRT1547241	hsa-miR-4681	CLIP-seq
MIRT2427748	hsa-miR-4687-5p	CLIP-seq
MIRT1547242	hsa-miR-4691-3p	CLIP-seq
MIRT1547243	hsa-miR-4695-5p	CLIP-seq
MIRT2427749	hsa-miR-4705	CLIP-seq
MIRT2427750	hsa-miR-4709-3p	CLIP-seq
MIRT903087	hsa-miR-4712-3p	CLIP-seq
MIRT903088	hsa-miR-4719	CLIP-seq
MIRT1547244	hsa-miR-4722-5p	CLIP-seq
MIRT1547245	hsa-miR-4728-3p	CLIP-seq
MIRT2427751	hsa-miR-4735-5p	CLIP-seq
MIRT2427752	hsa-miR-4753-5p	CLIP-seq
MIRT1547246	hsa-miR-4755-3p	CLIP-seq
MIRT2427753	hsa-miR-4756-3p	CLIP-seq
MIRT2427754	hsa-miR-4770	CLIP-seq
MIRT903089	hsa-miR-4772-3p	CLIP-seq
MIRT2427755	hsa-miR-4775	CLIP-seq
MIRT2203616	hsa-miR-4777-5p	CLIP-seq
MIRT2427756	hsa-miR-4778-3p	CLIP-seq
MIRT2427757	hsa-miR-4778-5p	CLIP-seq
MIRT903090	hsa-miR-4781-3p	CLIP-seq
MIRT1547247	hsa-miR-499-5p	CLIP-seq
MIRT2427758	hsa-miR-507	CLIP-seq
MIRT2427759	hsa-miR-508-3p	CLIP-seq
MIRT2427760	hsa-miR-509-3-5p	CLIP-seq
MIRT2427761	hsa-miR-509-5p	CLIP-seq
MIRT1547248	hsa-miR-5096	CLIP-seq
MIRT903091	hsa-miR-511	CLIP-seq
MIRT1547249	hsa-miR-513b	CLIP-seq
MIRT2427762	hsa-miR-517b	CLIP-seq
MIRT903092	hsa-miR-518a-5p	CLIP-seq
MIRT2203617	hsa-miR-518d-5p	CLIP-seq
MIRT2203618	hsa-miR-519b-5p	CLIP-seq
MIRT2203619	hsa-miR-519c-5p	CLIP-seq
MIRT2427763	hsa-miR-520a-5p	CLIP-seq
MIRT2203620	hsa-miR-520c-5p	CLIP-seq
MIRT2427764	hsa-miR-520d-5p	CLIP-seq
MIRT2427765	hsa-miR-520g	CLIP-seq
MIRT2427766	hsa-miR-520h	CLIP-seq
MIRT2427767	hsa-miR-522	CLIP-seq
MIRT2427768	hsa-miR-524-5p	CLIP-seq
MIRT2427769	hsa-miR-525-5p	CLIP-seq
MIRT2203621	hsa-miR-526a	CLIP-seq
MIRT903093	hsa-miR-527	CLIP-seq
MIRT2427770	hsa-miR-539	CLIP-seq
MIRT903094	hsa-miR-544	CLIP-seq
MIRT2427771	hsa-miR-548g	CLIP-seq
MIRT2427772	hsa-miR-548l	CLIP-seq
MIRT2427773	hsa-miR-548p	CLIP-seq
MIRT2427774	hsa-miR-557	CLIP-seq
MIRT2427775	hsa-miR-561	CLIP-seq
MIRT2427776	hsa-miR-578	CLIP-seq
MIRT2427777	hsa-miR-581	CLIP-seq
MIRT903097	hsa-miR-586	CLIP-seq
MIRT903098	hsa-miR-590-3p	CLIP-seq
MIRT2427778	hsa-miR-601	CLIP-seq
MIRT2427779	hsa-miR-613	CLIP-seq
MIRT1967781	hsa-miR-616	CLIP-seq
MIRT2427780	hsa-miR-7	CLIP-seq
MIRT2427781	hsa-miR-760	CLIP-seq
MIRT2427782	hsa-miR-766	CLIP-seq
MIRT903099	hsa-miR-769-3p	CLIP-seq
MIRT1547250	hsa-miR-885-5p	CLIP-seq
MIRT2427783	hsa-miR-944	CLIP-seq
MIRT2427784	hsa-miR-98	CLIP-seq
MIRT903098	hsa-miR-590-3p	CLIP-seq
MIRT2427677	hsa-let-7a	CLIP-seq
MIRT2427678	hsa-let-7b	CLIP-seq
MIRT2427679	hsa-let-7c	CLIP-seq
MIRT2427680	hsa-let-7d	CLIP-seq
MIRT2427681	hsa-let-7e	CLIP-seq
MIRT2427682	hsa-let-7f	CLIP-seq
MIRT2427683	hsa-let-7g	CLIP-seq
MIRT2427684	hsa-let-7i	CLIP-seq
MIRT1967776	hsa-miR-1257	CLIP-seq
MIRT1547215	hsa-miR-1266	CLIP-seq
MIRT2427692	hsa-miR-129-3p	CLIP-seq
MIRT1547216	hsa-miR-132	CLIP-seq
MIRT1547219	hsa-miR-212	CLIP-seq
MIRT2427699	hsa-miR-23a	CLIP-seq
MIRT2427700	hsa-miR-23b	CLIP-seq
MIRT2427701	hsa-miR-23c	CLIP-seq
MIRT1547220	hsa-miR-29a	CLIP-seq
MIRT1547221	hsa-miR-29b	CLIP-seq
MIRT1547222	hsa-miR-29c	CLIP-seq
MIRT2427705	hsa-miR-3125	CLIP-seq
MIRT903067	hsa-miR-3147	CLIP-seq
MIRT1547224	hsa-miR-3148	CLIP-seq
MIRT1547225	hsa-miR-3157-5p	CLIP-seq
MIRT2427707	hsa-miR-3173-5p	CLIP-seq
MIRT903069	hsa-miR-323-5p	CLIP-seq
MIRT1547227	hsa-miR-335	CLIP-seq
MIRT2427713	hsa-miR-337-3p	CLIP-seq
MIRT1967777	hsa-miR-3611	CLIP-seq
MIRT1547228	hsa-miR-3664-3p	CLIP-seq
MIRT1547230	hsa-miR-3673	CLIP-seq
MIRT1547231	hsa-miR-3682-5p	CLIP-seq
MIRT2427722	hsa-miR-3685	CLIP-seq
MIRT2427723	hsa-miR-369-3p	CLIP-seq
MIRT2427725	hsa-miR-384	CLIP-seq
MIRT1967778	hsa-miR-3907	CLIP-seq
MIRT2427726	hsa-miR-3916	CLIP-seq
MIRT2427727	hsa-miR-3925-3p	CLIP-seq
MIRT2427728	hsa-miR-3926	CLIP-seq
MIRT2427729	hsa-miR-3928	CLIP-seq
MIRT1556193	hsa-miR-3942-3p	CLIP-seq
MIRT2427730	hsa-miR-3973	CLIP-seq
MIRT903075	hsa-miR-409-3p	CLIP-seq
MIRT1967779	hsa-miR-4289	CLIP-seq
MIRT1547234	hsa-miR-4307	CLIP-seq
MIRT1547235	hsa-miR-432	CLIP-seq
MIRT2427735	hsa-miR-4328	CLIP-seq
MIRT903077	hsa-miR-4425	CLIP-seq
MIRT2427738	hsa-miR-4458	CLIP-seq
MIRT2427742	hsa-miR-4500	CLIP-seq
MIRT1547237	hsa-miR-4518	CLIP-seq
MIRT903084	hsa-miR-4639-5p	CLIP-seq
MIRT1547241	hsa-miR-4681	CLIP-seq
MIRT2427748	hsa-miR-4687-5p	CLIP-seq
MIRT1547242	hsa-miR-4691-3p	CLIP-seq
MIRT2427751	hsa-miR-4735-5p	CLIP-seq
MIRT2427752	hsa-miR-4753-5p	CLIP-seq
MIRT1547246	hsa-miR-4755-3p	CLIP-seq
MIRT2427755	hsa-miR-4775	CLIP-seq
MIRT2203616	hsa-miR-4777-5p	CLIP-seq
MIRT903090	hsa-miR-4781-3p	CLIP-seq
MIRT1967780	hsa-miR-4790-3p	CLIP-seq
MIRT1547248	hsa-miR-5096	CLIP-seq
MIRT1547249	hsa-miR-513b	CLIP-seq
MIRT2427762	hsa-miR-517b	CLIP-seq
MIRT2203617	hsa-miR-518d-5p	CLIP-seq
MIRT2203618	hsa-miR-519b-5p	CLIP-seq
MIRT2203619	hsa-miR-519c-5p	CLIP-seq
MIRT2203620	hsa-miR-520c-5p	CLIP-seq
MIRT2427765	hsa-miR-520g	CLIP-seq
MIRT2427766	hsa-miR-520h	CLIP-seq
MIRT2427767	hsa-miR-522	CLIP-seq
MIRT2203621	hsa-miR-526a	CLIP-seq
MIRT2427776	hsa-miR-578	CLIP-seq
MIRT2427777	hsa-miR-581	CLIP-seq
MIRT903098	hsa-miR-590-3p	CLIP-seq
MIRT2427778	hsa-miR-601	CLIP-seq
MIRT1967781	hsa-miR-616	CLIP-seq
MIRT2427782	hsa-miR-766	CLIP-seq
MIRT1967782	hsa-miR-876-3p	CLIP-seq
MIRT1547250	hsa-miR-885-5p	CLIP-seq
MIRT2427784	hsa-miR-98	CLIP-seq
MIRT2427685	hsa-miR-1	CLIP-seq
MIRT2427686	hsa-miR-101	CLIP-seq
MIRT2427687	hsa-miR-105	CLIP-seq
MIRT2427688	hsa-miR-1179	CLIP-seq
MIRT2427689	hsa-miR-1184	CLIP-seq
MIRT2506663	hsa-miR-1185	CLIP-seq
MIRT2427690	hsa-miR-1193	CLIP-seq
MIRT2506664	hsa-miR-1224-5p	CLIP-seq
MIRT2506665	hsa-miR-1238	CLIP-seq
MIRT1547214	hsa-miR-1245	CLIP-seq
MIRT2427694	hsa-miR-1305	CLIP-seq
MIRT1547216	hsa-miR-132	CLIP-seq
MIRT903061	hsa-miR-135a	CLIP-seq
MIRT903062	hsa-miR-135b	CLIP-seq
MIRT2427696	hsa-miR-144	CLIP-seq
MIRT2427698	hsa-miR-206	CLIP-seq
MIRT1547217	hsa-miR-208a	CLIP-seq
MIRT1547218	hsa-miR-208b	CLIP-seq
MIRT1547219	hsa-miR-212	CLIP-seq
MIRT903063	hsa-miR-2276	CLIP-seq
MIRT2427702	hsa-miR-2467-3p	CLIP-seq
MIRT903065	hsa-miR-297	CLIP-seq
MIRT1547220	hsa-miR-29a	CLIP-seq
MIRT1547221	hsa-miR-29b	CLIP-seq
MIRT1547222	hsa-miR-29c	CLIP-seq
MIRT2427703	hsa-miR-3065-5p	CLIP-seq
MIRT2427704	hsa-miR-3121-3p	CLIP-seq
MIRT903066	hsa-miR-3122	CLIP-seq
MIRT2427705	hsa-miR-3125	CLIP-seq
MIRT2506666	hsa-miR-3144-5p	CLIP-seq
MIRT903068	hsa-miR-3149	CLIP-seq
MIRT2427708	hsa-miR-3180-5p	CLIP-seq
MIRT2427709	hsa-miR-3185	CLIP-seq
MIRT903069	hsa-miR-323-5p	CLIP-seq
MIRT2427712	hsa-miR-330-3p	CLIP-seq
MIRT2506667	hsa-miR-3605-5p	CLIP-seq
MIRT2427716	hsa-miR-3613-5p	CLIP-seq
MIRT2506668	hsa-miR-3617	CLIP-seq
MIRT2427717	hsa-miR-3649	CLIP-seq
MIRT2427718	hsa-miR-3653	CLIP-seq
MIRT2427719	hsa-miR-3658	CLIP-seq
MIRT2427720	hsa-miR-3663-5p	CLIP-seq
MIRT1547230	hsa-miR-3673	CLIP-seq
MIRT2427721	hsa-miR-3678-3p	CLIP-seq
MIRT2506669	hsa-miR-3679-5p	CLIP-seq
MIRT2427724	hsa-miR-382	CLIP-seq
MIRT903074	hsa-miR-3913-5p	CLIP-seq
MIRT2506670	hsa-miR-3915	CLIP-seq
MIRT2427726	hsa-miR-3916	CLIP-seq
MIRT2427729	hsa-miR-3928	CLIP-seq
MIRT1556193	hsa-miR-3942-3p	CLIP-seq
MIRT2427731	hsa-miR-425	CLIP-seq
MIRT2506671	hsa-miR-4252	CLIP-seq
MIRT2427732	hsa-miR-4272	CLIP-seq
MIRT2427733	hsa-miR-4275	CLIP-seq
MIRT2506672	hsa-miR-4279	CLIP-seq
MIRT2427734	hsa-miR-4281	CLIP-seq
MIRT2506673	hsa-miR-4286	CLIP-seq
MIRT1967779	hsa-miR-4289	CLIP-seq
MIRT1547234	hsa-miR-4307	CLIP-seq
MIRT1547235	hsa-miR-432	CLIP-seq
MIRT2427735	hsa-miR-4328	CLIP-seq
MIRT2427736	hsa-miR-4418	CLIP-seq
MIRT2427737	hsa-miR-4422	CLIP-seq
MIRT2506674	hsa-miR-4427	CLIP-seq
MIRT2506675	hsa-miR-4457	CLIP-seq
MIRT2427739	hsa-miR-4474-3p	CLIP-seq
MIRT2506676	hsa-miR-4503	CLIP-seq
MIRT903082	hsa-miR-450b-3p	CLIP-seq
MIRT2427747	hsa-miR-4666-5p	CLIP-seq
MIRT903086	hsa-miR-4668-3p	CLIP-seq
MIRT1547241	hsa-miR-4681	CLIP-seq
MIRT2506677	hsa-miR-4689	CLIP-seq
MIRT2427749	hsa-miR-4705	CLIP-seq
MIRT2427750	hsa-miR-4709-3p	CLIP-seq
MIRT903087	hsa-miR-4712-3p	CLIP-seq
MIRT903088	hsa-miR-4719	CLIP-seq
MIRT2506678	hsa-miR-4722-3p	CLIP-seq
MIRT2506679	hsa-miR-4731-3p	CLIP-seq
MIRT2427751	hsa-miR-4735-5p	CLIP-seq
MIRT1547246	hsa-miR-4755-3p	CLIP-seq
MIRT2427753	hsa-miR-4756-3p	CLIP-seq
MIRT903089	hsa-miR-4772-3p	CLIP-seq
MIRT2427755	hsa-miR-4775	CLIP-seq
MIRT2506680	hsa-miR-4801	CLIP-seq
MIRT1547247	hsa-miR-499-5p	CLIP-seq
MIRT2427759	hsa-miR-508-3p	CLIP-seq
MIRT2427760	hsa-miR-509-3-5p	CLIP-seq
MIRT2427761	hsa-miR-509-5p	CLIP-seq
MIRT1547248	hsa-miR-5096	CLIP-seq
MIRT903091	hsa-miR-511	CLIP-seq
MIRT1547249	hsa-miR-513b	CLIP-seq
MIRT2427762	hsa-miR-517b	CLIP-seq
MIRT903092	hsa-miR-518a-5p	CLIP-seq
MIRT2427763	hsa-miR-520a-5p	CLIP-seq
MIRT2427764	hsa-miR-520d-5p	CLIP-seq
MIRT2427768	hsa-miR-524-5p	CLIP-seq
MIRT2427769	hsa-miR-525-5p	CLIP-seq
MIRT903093	hsa-miR-527	CLIP-seq
MIRT2427770	hsa-miR-539	CLIP-seq
MIRT903094	hsa-miR-544	CLIP-seq
MIRT2506681	hsa-miR-548a-3p	CLIP-seq
MIRT2203622	hsa-miR-548c-3p	CLIP-seq
MIRT2506682	hsa-miR-548e	CLIP-seq
MIRT2506683	hsa-miR-548f	CLIP-seq
MIRT2427771	hsa-miR-548g	CLIP-seq
MIRT2427773	hsa-miR-548p	CLIP-seq
MIRT903097	hsa-miR-586	CLIP-seq
MIRT2427778	hsa-miR-601	CLIP-seq
MIRT2427779	hsa-miR-613	CLIP-seq
MIRT1967781	hsa-miR-616	CLIP-seq
MIRT2506684	hsa-miR-641	CLIP-seq
MIRT2427781	hsa-miR-760	CLIP-seq
MIRT903099	hsa-miR-769-3p	CLIP-seq
MIRT2427685	hsa-miR-1	CLIP-seq
MIRT2427686	hsa-miR-101	CLIP-seq
MIRT2427687	hsa-miR-105	CLIP-seq
MIRT2427688	hsa-miR-1179	CLIP-seq
MIRT2427689	hsa-miR-1184	CLIP-seq
MIRT2506663	hsa-miR-1185	CLIP-seq
MIRT2427690	hsa-miR-1193	CLIP-seq
MIRT2506664	hsa-miR-1224-5p	CLIP-seq
MIRT2506665	hsa-miR-1238	CLIP-seq
MIRT1547214	hsa-miR-1245	CLIP-seq
MIRT2427694	hsa-miR-1305	CLIP-seq
MIRT1547216	hsa-miR-132	CLIP-seq
MIRT903061	hsa-miR-135a	CLIP-seq
MIRT903062	hsa-miR-135b	CLIP-seq
MIRT2427696	hsa-miR-144	CLIP-seq
MIRT2427698	hsa-miR-206	CLIP-seq
MIRT1547217	hsa-miR-208a	CLIP-seq
MIRT1547218	hsa-miR-208b	CLIP-seq
MIRT1547219	hsa-miR-212	CLIP-seq
MIRT903063	hsa-miR-2276	CLIP-seq
MIRT2427702	hsa-miR-2467-3p	CLIP-seq
MIRT903065	hsa-miR-297	CLIP-seq
MIRT1547220	hsa-miR-29a	CLIP-seq
MIRT1547221	hsa-miR-29b	CLIP-seq
MIRT1547222	hsa-miR-29c	CLIP-seq
MIRT2427703	hsa-miR-3065-5p	CLIP-seq
MIRT2427704	hsa-miR-3121-3p	CLIP-seq
MIRT903066	hsa-miR-3122	CLIP-seq
MIRT2427705	hsa-miR-3125	CLIP-seq
MIRT2506666	hsa-miR-3144-5p	CLIP-seq
MIRT903068	hsa-miR-3149	CLIP-seq
MIRT2427708	hsa-miR-3180-5p	CLIP-seq
MIRT2427709	hsa-miR-3185	CLIP-seq
MIRT903069	hsa-miR-323-5p	CLIP-seq
MIRT2427712	hsa-miR-330-3p	CLIP-seq
MIRT2506667	hsa-miR-3605-5p	CLIP-seq
MIRT2427716	hsa-miR-3613-5p	CLIP-seq
MIRT2506668	hsa-miR-3617	CLIP-seq
MIRT2427717	hsa-miR-3649	CLIP-seq
MIRT2427718	hsa-miR-3653	CLIP-seq
MIRT2427719	hsa-miR-3658	CLIP-seq
MIRT2427720	hsa-miR-3663-5p	CLIP-seq
MIRT1547230	hsa-miR-3673	CLIP-seq
MIRT2427721	hsa-miR-3678-3p	CLIP-seq
MIRT2506669	hsa-miR-3679-5p	CLIP-seq
MIRT2427724	hsa-miR-382	CLIP-seq
MIRT903074	hsa-miR-3913-5p	CLIP-seq
MIRT2506670	hsa-miR-3915	CLIP-seq
MIRT2427726	hsa-miR-3916	CLIP-seq
MIRT2427729	hsa-miR-3928	CLIP-seq
MIRT1556193	hsa-miR-3942-3p	CLIP-seq
MIRT2427731	hsa-miR-425	CLIP-seq
MIRT2506671	hsa-miR-4252	CLIP-seq
MIRT2427732	hsa-miR-4272	CLIP-seq
MIRT2427733	hsa-miR-4275	CLIP-seq
MIRT2506672	hsa-miR-4279	CLIP-seq
MIRT2427734	hsa-miR-4281	CLIP-seq
MIRT2506673	hsa-miR-4286	CLIP-seq
MIRT1967779	hsa-miR-4289	CLIP-seq
MIRT1547234	hsa-miR-4307	CLIP-seq
MIRT1547235	hsa-miR-432	CLIP-seq
MIRT2427735	hsa-miR-4328	CLIP-seq
MIRT2427736	hsa-miR-4418	CLIP-seq
MIRT2427737	hsa-miR-4422	CLIP-seq
MIRT2506674	hsa-miR-4427	CLIP-seq
MIRT2506675	hsa-miR-4457	CLIP-seq
MIRT2427739	hsa-miR-4474-3p	CLIP-seq
MIRT2506676	hsa-miR-4503	CLIP-seq
MIRT903082	hsa-miR-450b-3p	CLIP-seq
MIRT2427747	hsa-miR-4666-5p	CLIP-seq
MIRT903086	hsa-miR-4668-3p	CLIP-seq
MIRT1547241	hsa-miR-4681	CLIP-seq
MIRT2506677	hsa-miR-4689	CLIP-seq
MIRT2427749	hsa-miR-4705	CLIP-seq
MIRT2427750	hsa-miR-4709-3p	CLIP-seq
MIRT903087	hsa-miR-4712-3p	CLIP-seq
MIRT903088	hsa-miR-4719	CLIP-seq
MIRT2506678	hsa-miR-4722-3p	CLIP-seq
MIRT2506679	hsa-miR-4731-3p	CLIP-seq
MIRT2427751	hsa-miR-4735-5p	CLIP-seq
MIRT1547246	hsa-miR-4755-3p	CLIP-seq
MIRT2427753	hsa-miR-4756-3p	CLIP-seq
MIRT903089	hsa-miR-4772-3p	CLIP-seq
MIRT2427755	hsa-miR-4775	CLIP-seq
MIRT2203616	hsa-miR-4777-5p	CLIP-seq
MIRT2506680	hsa-miR-4801	CLIP-seq
MIRT1547247	hsa-miR-499-5p	CLIP-seq
MIRT2427759	hsa-miR-508-3p	CLIP-seq
MIRT2427760	hsa-miR-509-3-5p	CLIP-seq
MIRT2427761	hsa-miR-509-5p	CLIP-seq
MIRT1547248	hsa-miR-5096	CLIP-seq
MIRT903091	hsa-miR-511	CLIP-seq
MIRT1547249	hsa-miR-513b	CLIP-seq
MIRT2427762	hsa-miR-517b	CLIP-seq
MIRT903092	hsa-miR-518a-5p	CLIP-seq
MIRT2203617	hsa-miR-518d-5p	CLIP-seq
MIRT2203618	hsa-miR-519b-5p	CLIP-seq
MIRT2203619	hsa-miR-519c-5p	CLIP-seq
MIRT2427763	hsa-miR-520a-5p	CLIP-seq
MIRT2203620	hsa-miR-520c-5p	CLIP-seq
MIRT2427764	hsa-miR-520d-5p	CLIP-seq
MIRT2427768	hsa-miR-524-5p	CLIP-seq
MIRT2427769	hsa-miR-525-5p	CLIP-seq
MIRT2203621	hsa-miR-526a	CLIP-seq
MIRT903093	hsa-miR-527	CLIP-seq
MIRT2427770	hsa-miR-539	CLIP-seq
MIRT903094	hsa-miR-544	CLIP-seq
MIRT2506681	hsa-miR-548a-3p	CLIP-seq
MIRT2203622	hsa-miR-548c-3p	CLIP-seq
MIRT2506682	hsa-miR-548e	CLIP-seq
MIRT2506683	hsa-miR-548f	CLIP-seq
MIRT2427771	hsa-miR-548g	CLIP-seq
MIRT2427773	hsa-miR-548p	CLIP-seq
MIRT903097	hsa-miR-586	CLIP-seq
MIRT903098	hsa-miR-590-3p	CLIP-seq
MIRT2427778	hsa-miR-601	CLIP-seq
MIRT2427779	hsa-miR-613	CLIP-seq
MIRT1967781	hsa-miR-616	CLIP-seq
MIRT2506684	hsa-miR-641	CLIP-seq
MIRT2427781	hsa-miR-760	CLIP-seq
MIRT903099	hsa-miR-769-3p	CLIP-seq

Show/Hide all(25)

GO ID	Ontology	Definition	Evidence	Reference
GO:0001501	Process	Skeletal system development	IEA
GO:0001503	Process	Ossification	IEA
GO:0005201	Function	Extracellular matrix structural constituent	IBA	21873635
GO:0005576	Component	Extracellular region	TAS
GO:0005588	Component	Collagen type V trimer	IBA	21873635
GO:0005588	Component	Collagen type V trimer	IMP	9425231, 9783710
GO:0005615	Component	Extracellular space	IBA	21873635
GO:0005788	Component	Endoplasmic reticulum lumen	TAS
GO:0030020	Function	Extracellular matrix structural constituent conferring tensile strength	HDA	28344315
GO:0030020	Function	Extracellular matrix structural constituent conferring tensile strength	RCA	25037231, 27068509, 27559042, 28327460, 28675934
GO:0030198	Process	Extracellular matrix organization	IBA	21873635
GO:0030198	Process	Extracellular matrix organization	TAS
GO:0030199	Process	Collagen fibril organization	IMP	9425231
GO:0030199	Process	Collagen fibril organization	ISS
GO:0031012	Component	Extracellular matrix	IBA	21873635
GO:0031012	Component	Extracellular matrix	NAS	17666000
GO:0043588	Process	Skin development	IBA	21873635
GO:0043588	Process	Skin development	IMP	9425231
GO:0043588	Process	Skin development	ISS
GO:0046332	Function	SMAD binding	IEA
GO:0046872	Function	Metal ion binding	IEA
GO:0048592	Process	Eye morphogenesis	IMP	16431952
GO:0062023	Component	Collagen-containing extracellular matrix	HDA	25037231, 27068509, 27559042, 28327460, 28344315, 28675934
GO:0071230	Process	Cellular response to amino acid stimulus	IEA
GO:1903225	Process	Negative regulation of endodermal cell differentiation	IDA	23154389

MIM	HGNC	e!Ensembl
120190	2210	ENSG00000204262

Protein

UniProt ID

P05997

Protein name

Collagen alpha-2(V) chain

Protein function

Type V collagen is a member of group I collagen (fibrillar forming collagen). It is a minor connective tissue component of nearly ubiquitous distribution. Type V collagen binds to DNA, heparan sulfate, thrombospondin, heparin, and insulin. Type

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00093	VWC	41 → 96	von Willebrand factor type C domain	Family
PF01391	Collagen	125 → 187	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	209 → 272	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	834 → 904	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	1110 → 1180	Collagen triple helix repeat (20 copies)	Repeat
PF01391	Collagen	1170 → 1232	Collagen triple helix repeat (20 copies)	Repeat
PF01410	COLFI	1264 → 1498	Fibrillar collagen C-terminal domain	Family

Sequence

MMANWAEARPLLILIVLLGQFVSIKAQEEDEDEGYGEEIACTQNGQMYLNRDIWKPAPCQ
ICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGGGNTNFGRGRKGQKGEPGL
VPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPS
HPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPG
EPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKG
HRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHG
MPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPG
AIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAG
PKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKG
AQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPG
PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG
LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG
EPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRG
GIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENG
PTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRG
TQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAG
PPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVG
PTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPG
SQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG
QKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPG
VRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDD
KNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSV
EDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSP
NTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIR
FRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV

Sequence length

1499

Interactions

View interactions

	KEGG		Reactome
	Cytoskeleton in muscle cells Protein digestion and absorption		Collagen degradation Extracellular matrix organization Collagen biosynthesis and modifying enzymes Signaling by PDGF Assembly of collagen fibrils and other multimeric structures Integrin cell surface interactions Non-integrin membrane-ECM interactions ECM proteoglycans NCAM1 interactions MET activates PTK2 signaling Collagen chain trimerization

Show/Hide Causal Diseases (19)

Disease term	Disease name	dbSNP ID	References
Causal
Aortic aneurysm	Aneurysm, Dissecting	rs1555554098, rs267606902, rs121434526, rs121434527, rs121434528, rs387906592, rs387906781, rs387906782, rs397516685, rs397514037, rs112901682, rs397515325, rs397515330, rs794728025, rs112602953 View all (29 more)
Arthritis	Degenerative polyarthritis	rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470
Atrial septal defect	Atrial Septal Defects	rs137852951, rs137852953, rs137852955, rs267607106, rs104893900, rs104893901, rs104893903, rs606231358, rs606231359, rs137852683, rs606231360, rs104893907, rs104894073, rs1585703301, rs104894074 View all (25 more)
Autoimmune lymphoproliferative disorder	Autoimmune Lymphoproliferative Syndrome Type 2B	rs17860424, rs112445441, rs121913529, rs121434596, rs80358236, rs606231361, rs606231362, rs121913076, rs606231363, rs121913077, rs28929498, rs121913080, rs267607122, rs606231364, rs606231365 View all (31 more)	9425231
Connective tissue disease	Connective Tissue Diseases	rs5742905, rs80338688, rs80356506, rs104894800, rs104894948, rs28931614, rs121913482, rs28933068, rs121913483, rs137854464, rs121912870, rs387906980, rs587777352, rs527236145, rs189754995 View all (12 more)
Corneal dystrophy	Corneal dystrophy	rs121909212, rs121909214, rs760714959, rs766305306, rs1554579819, rs1554579832, rs1554579878
Ectopia lentis	Ectopia Lentis	rs118203985, rs137854464, rs137854480, rs587776927, rs199473693, rs794726688, rs368482584, rs794726689, rs747160538, rs397514558, rs397515793, rs757318536, rs781691587, rs363806
Ehlers-danlos syndrome	Ehlers-Danlos Syndrome, Autosomal Dominant, Type Unspecified, Ehlers-Danlos syndrome type 1, Ehlers-Danlos syndrome type 2	rs121917817, rs121917818, rs28937869, rs764070148, rs144556766, rs121913550, rs121913552, rs80338764, rs121912933, rs786205103, rs786205104, rs121912930, rs397509369, rs113485686, rs121912914 View all (490 more)	22696272, 15580559, 9425231
Classical-like ehlers-danlos syndrome	Ehlers-Danlos syndrome classic type, EHLERS-DANLOS SYNDROME, CLASSIC TYPE, 2, EHLERS-DANLOS SYNDROME, CLASSIC TYPE, 1, Classical Ehlers-Danlos syndrome	rs786200922, rs786200923, rs80338764, rs2132830442, rs183495554, rs765079080, rs786205100, rs121912933, rs786205101, rs786205102, rs121912930, rs387906606, rs863223491, rs863223444, rs863223469 View all (82 more)	9425231, 19344236, 27656288, 22696272, 25987251, 7695699, 8218237, 9783710, 23587214, 28868310, 29543232
Glaucoma	Glaucoma	rs121918355, rs1566660365, rs1566635134, rs121918356, rs1566634475, rs28936700, rs55771538, rs28936701, rs104893622, rs55989760, rs72549387, rs104893628, rs2125316417, rs104893629, rs74315328 View all (29 more)
Hypertension	Hypertensive disease	rs13306026
Migraine	Migraine Disorders	rs794727411
Mitral valve prolapse	Mitral Valve Prolapse Syndrome	rs768737101
Multisystemic smooth muscle dysfunction syndrome	MULTISYSTEMIC SMOOTH MUSCLE DYSFUNCTION SYNDROME	rs387906592, rs886039303	28868310, 29543232
Myopia	Myopia	rs387907109, rs146936371, rs587776903, rs786205127, rs398122836, rs199624584, rs587777625, rs786205216, rs758872875, rs764211125, rs1135402746, rs765658563, rs1555941129, rs1555941116, rs199923805 View all (6 more)
Parkinson disease	Parkinson Disease	rs33939927, rs35801418, rs34805604, rs35870237, rs34995376, rs74315355, rs28940284, rs74315356, rs74315357, rs28940285, rs730880302, rs750664040, rs74315359, rs74315360, rs45539432 View all (84 more)	26227905
Retinal detachment	Retinal Detachment	rs1555976049, rs1592230091
Scoliosis	Scoliosis, unspecified	rs1057518828, rs147296805, rs758163506, rs1555613564, rs1596852902, rs1596853067, rs1596853085
Thoracic aortic aneurysm and aortic dissection	Familial thoracic aortic aneurysm and aortic dissection	rs121964962, rs121964964, rs5742905, rs121964969, rs28934891, rs375846341, rs121964972, rs121964973, rs587776600, rs121908172, rs121908173, rs121918714, rs104893809, rs104893815, rs104893810 View all (614 more)

Show/Hide Unknown Diseases (3)

Disease term	Disease name	Evidence	Source
Unknown
Asthma	Asthma		ClinVar
Ehlers-Danlos Syndrome	Ehlers-Danlos syndrome, classic type, Ehlers-Danlos syndrome		GenCC
Breast Cancer	Breast Cancer	Importantly, breast cancer patients bearing PRC2 LOF mutations displayed significantly worse prognosis compared with PRC2 wild-type patients	GWAS, CBGDA

Show/Hide Text Mining Associations (65)

Disease Name	Relationship Type	References
Associations from Text Mining
Adenocarcinoma	Associate	27513329, 36452120
Adenocarcinoma of Lung	Associate	32819300, 34419075, 35238419
Aneurysm	Associate	26918470, 31538843
Aortic Dissection	Associate	20648054, 28855619
Arnold Chiari Malformation	Associate	33974636
Arthritis Rheumatoid	Associate	34766472
Autistic Disorder	Associate	35964930
Brain Neoplasms	Associate	31888563
Breast Neoplasms	Associate	34541602, 35741056
Buschke Ollendorff syndrome	Associate	22132895
Carcinogenesis	Associate	33035117
Carcinoma Pancreatic Ductal	Associate	31731384, 33221741
Carcinoma Squamous Cell	Associate	27164935
Cicatrix	Associate	31517854
Colonic Neoplasms	Associate	28742206, 31612481
Colorectal Neoplasms	Associate	31500382, 32356618
Connective Tissue Diseases	Associate	35964930
Constipation	Associate	35964930
Delayed Cranial Ossification due to CBFB Haploinsufficiency	Associate	20648054
Diabetes Gestational	Associate	20617897
Diabetic Foot	Associate	35964930
Dissection Blood Vessel	Associate	22617347
Ehlers Danlos Syndrome	Associate	21611149, 31517854, 33161638
Ehlers Danlos syndrome type 1	Associate	20648054, 23587214, 30716086, 31517854, 32720758, 32736638, 33834621, 34946877
Ehlers Danlos syndrome type 2	Associate	9783710
Ehlers Danlos syndrome type 3	Associate	35964930
Endometrial Neoplasms	Associate	23167388
Esophageal Squamous Cell Carcinoma	Associate	36238478
Genetic Diseases Inborn	Associate	20648054
Hemochromatosis type 4	Associate	20648054
Hemorrhage	Associate	33161638, 35964930
Hemorrhagic Disorders	Associate	33161638
Hypertension Pulmonary	Associate	37731513
Hypoxia	Associate	29517678
Idiopathic Pulmonary Fibrosis	Associate	37798725
Intellectual Disability	Associate	35964930
Intervertebral Disc Degeneration	Associate	32873329
Intracranial Aneurysm	Associate	26918470
Kashin Beck Disease	Associate	22776318
Leiomyoma	Associate	28715450
Lymphatic Metastasis	Stimulate	31888563
Lymphatic Metastasis	Associate	37800754
Marden Walker syndrome	Associate	9783710
Mesothelioma	Associate	36901697
Mouth Neoplasms	Associate	36849997
Myocardial Infarction	Associate	29049183
Myostatin related muscle hypertrophy	Associate	20648054
Neoplasm Metastasis	Associate	33035117, 33607786
Neoplasms	Associate	29517678, 31888563, 33750326, 36447214, 37723519
Neoplasms	Stimulate	37800754
Non Muscle Invasive Bladder Neoplasms	Associate	33035117
Ovarian Neoplasms	Associate	25551281, 31969186
Pancreatic Neoplasms	Associate	31706267
Pheochromocytoma	Associate	33828526
Prostatic Neoplasms	Associate	37008945
Pulmonary Fibrosis	Associate	37731513
Scleroderma Diffuse	Associate	27111861
Scoliosis	Associate	33834621
Squamous Cell Carcinoma of Head and Neck	Associate	34999279
Stomach Neoplasms	Associate	28058586, 28078605, 28560594, 30948703, 32058995, 32908877, 33178362, 33607786, 34281542, 34899080, 35328635, 36447214, 37082997, 37312060, 37800754, 38041130 View all (1 more)
Stomach Neoplasms	Stimulate	33381592, 37723519, 38129820
Thyroid Cancer Papillary	Associate	28402931
Urinary Bladder Neoplasms	Associate	29517678, 33035117
Urinary Bladder Neoplasms	Stimulate	37988196
von Hippel Lindau Disease	Stimulate	33828526

COL5A2 (collagen type V alpha 2 chain)