Gene Gene information from NCBI Gene database.
Entrez ID 124540
Gene name Musashi RNA binding protein 2
Gene symbol MSI2
Synonyms (NCBI Gene)
MSI2H
Chromosome 17
Chromosome location 17q22
Summary This gene encodes an RNA-binding protein that is a member of the Musashi protein family. The encoded protein is transcriptional regulator that targets genes involved in development and cell cycle regulation. Mutations in this gene are associated with poor
miRNA miRNA information provided by mirtarbase database.
311
miRTarBase ID miRNA Experiments Reference
MIRT001533 hsa-miR-155-5p pSILAC 18668040
MIRT001533 hsa-miR-155-5p Western blot 20584899
MIRT042254 hsa-miR-484 CLASH 23622248
MIRT039469 hsa-miR-652-3p CLASH 23622248
MIRT493077 hsa-miR-5580-3p HITS-CLIP 21572407
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
15
GO ID Ontology Definition Evidence Reference
GO:0003676 Function Nucleic acid binding IEA
GO:0003723 Function RNA binding HDA 22658674, 22681889
GO:0003723 Function RNA binding IEA
GO:0003727 Function Single-stranded RNA binding IEA
GO:0003729 Function MRNA binding IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
607897 18585 ENSG00000153944
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96DH6
Protein name RNA-binding protein Musashi homolog 2 (Musashi-2)
Protein function RNA binding protein that regulates the expression of target mRNAs at the translation level. May play a role in the proliferation and maintenance of stem cells in the central nervous system (By similarity).
PDB 6C8U , 6DBP , 6NTY
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00076 RRM_1 23 92 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Domain
PF00076 RRM_1 112 181 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous; detected at low levels. {ECO:0000269|PubMed:12649177}.
Sequence
MEANGSQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADPASVDKVLGQPHHELDSKTID
PKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
E
CKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQ
FPGFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGPVADLYGPASQDSGVGNYIS
AASPQPGSGFGHGIAGPLIATAFTNGYH
Sequence length 328
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG 
  mRNA surveillance pathway  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
12
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ANDROGENETIC ALOPECIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CANNABIS DEPENDENCE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CLONAL HEMATOPOIESIS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COLOR VISION DISORDER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References Evidence Score
Adenocarcinoma of Lung Associate 34145929
★☆☆☆☆
Found in Text Mining only
Adenoma Associate 34237057
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Associate 27941885, 35589867
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Stimulate 24305552
★☆☆☆☆
Found in Text Mining only
Colorectal Neoplasms Associate 26775684, 30604502, 32828126, 34237057, 40302097
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus Associate 28542303
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus Type 2 Associate 28542303
★☆☆☆☆
Found in Text Mining only
Dyslexia Associate 23190410
★☆☆☆☆
Found in Text Mining only
Endometriosis Associate 35269992
★☆☆☆☆
Found in Text Mining only
Glioblastoma Associate 34047477
★☆☆☆☆
Found in Text Mining only