Gene Gene information from NCBI Gene database.
Entrez ID 11178
Gene name Leucine zipper tumor suppressor 1
Gene symbol LZTS1
Synonyms (NCBI Gene)
F37FEZ1
Chromosome 8
Chromosome location 8p21.3
Summary This gene encodes a tumor suppressor protein that is ubiquitously expressed in normal tissues. In uveal melanomas, expression of this protein is silenced in rapidly metastasizing and metastatic tumor cells but has normal expression in slowly metastasizing
SNPs SNP information provided by dbSNP.
2
SNP ID Visualize variation Clinical significance Consequence
rs28937897 A>G Pathogenic Coding sequence variant, missense variant
rs119473032 T>C Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
337
miRTarBase ID miRNA Experiments Reference
MIRT437778 hsa-miR-135b-5p 5.0 23695671
MIRT437778 hsa-miR-135b-5p 5.0 23695671
MIRT438741 hsa-miR-214-3p 5.0 24802407
MIRT438741 hsa-miR-214-3p 5.0 24802407
MIRT438741 hsa-miR-214-3p 5.0 24802407
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
14
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 17349584, 32296183
GO:0005737 Component Cytoplasm IEA
GO:0005886 Component Plasma membrane IEA
GO:0014069 Component Postsynaptic density IEA
GO:0016020 Component Membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606551 13861 ENSG00000061337
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9Y250
Protein name Leucine zipper putative tumor suppressor 1 (F37/esophageal cancer-related gene-coding leucine-zipper motif) (Fez1)
Protein function Involved in the regulation of cell growth. May stabilize the active CDC2-cyclin B1 complex and thereby contribute to the regulation of the cell cycle and the prevention of uncontrolled cell proliferation. May act as a tumor suppressor. {ECO:0000
PDB 8Y1U
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF06818 Fez1 380 565 Coiled-coil
Tissue specificity TISSUE SPECIFICITY: Highly expressed in testis, prostate, spleen, thymus, ovary and brain. Detected at lower levels in heart, placenta, small intestine, colon, liver, kidney, skeletal muscle and pancreas. Not detectable in primary tumors from breast and p
Sequence
MGSVSSLISGHSFHSKHCRASQYKLRKSSHLKKLNRYSDGLLRFGFSQDSGHGKSSSKMG
KSEDFFYIKVSQKARGSHHPDYTALSSGDLGGQAGVDFDPSTPPKLMPFSNQLEMGSEKG
AVRPTAFKPVLPRSGAILHSSPESASHQLHPAPPDKPKEQELKPGLCSGALSDSGRNSMS
SLPTHSTSSSYQLDPLVTPVGPTSRFGGSAHNITQGIVLQDSNMMSLKALSFSDGGSKLG
HSNKADKGPSCVRSPISTDECSIQELEQKLLEREGALQKLQRSFEEKELASSLAYEERPR
RCRDELEGPEPKGGNKLKQASQKSQRAQQVLHLQVLQLQQEKRQLRQELESLMKEQDLLE
TKLRSYEREKTSFGPALEETQWEVCQKSGEISLLKQQLKESQTEVNAKASEILGLKAQLK
DTRGKLEGLELRTQDLEGALRTKGLELEVCENELQRKKNEAELLREKVNLLEQELQELRA
QAALARDMGPPTFPEDVPALQRELERLRAELREERQGHDQMSSGFQHERLVWKEEKEKVI
QYQKQLQQSYVAMYQRNQRLEKALQ
QLARGDSAGEPLEVDLEGADIPYEDIIATEI
Sequence length 596
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
25
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Esophageal squamous cell carcinoma, somatic Pathogenic rs28937897, rs119473032 RCV000004467
RCV000004468
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Lung cancer Likely benign rs372926159 RCV005926602
LZTS1-related disorder Benign; Likely benign; Uncertain significance rs148039718, rs146193718, rs148775156, rs142969550, rs147895092, rs528144165, rs188889890, rs139782965, rs144922809, rs140920176, rs773191392, rs1027028571, rs140903284, rs146878421, rs201531859
View all (7 more)
RCV003903420
RCV003903416
RCV003911235
RCV003911229
RCV003951000
RCV003941339
RCV003923656
RCV003916374
RCV004749836
RCV003951307
RCV003395571
RCV003953962
RCV003936496
RCV003396975
RCV003414566
RCV003893448
RCV003893454
RCV003894423
RCV003914005
RCV003939710
RCV003971373
RCV003902963
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Breast Neoplasms Associate 11504921, 25813822
Breast Neoplasms Inhibit 18686028
Carcinoma Hepatocellular Associate 32311840
Carcinoma Squamous Cell Associate 25938461
Ehlers Danlos syndrome type 3 Associate 26504261
Joint Instability Associate 26504261
Kidney Neoplasms Associate 15357873
Lung Neoplasms Associate 15735004
Lymphatic Metastasis Associate 18686028
Lymphatic Metastasis Inhibit 25813822