Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	10437
Gene name Gene Name - the full gene name approved by the HGNC.	IFI30 lysosomal thiol reductase
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	IFI30
Synonyms (NCBI Gene) Gene synonyms aliases	GILT, IFI-30, IP-30, IP30
Chromosome Chromosome number	19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	19p13.11
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene is a lysosomal thiol reductase that at low pH can reduce protein disulfide bonds. The enzyme is expressed constitutively in antigen-presenting cells and induced by gamma-interferon in other cell types. This enzyme has an i

Show/Hide all(50)

miRTarBase ID	miRNA	Experiments	Reference
MIRT045663	hsa-miR-149-5p	CLASH	23622248
MIRT1060202	hsa-miR-1182	CLIP-seq
MIRT1060203	hsa-miR-1285	CLIP-seq
MIRT1060204	hsa-miR-145	CLIP-seq
MIRT1060205	hsa-miR-2113	CLIP-seq
MIRT1060206	hsa-miR-2681	CLIP-seq
MIRT1060207	hsa-miR-29a	CLIP-seq
MIRT1060208	hsa-miR-29b	CLIP-seq
MIRT1060209	hsa-miR-29c	CLIP-seq
MIRT1060210	hsa-miR-3126-3p	CLIP-seq
MIRT1060211	hsa-miR-3163	CLIP-seq
MIRT1060212	hsa-miR-3180-5p	CLIP-seq
MIRT1060213	hsa-miR-3187-5p	CLIP-seq
MIRT1060214	hsa-miR-342-5p	CLIP-seq
MIRT1060215	hsa-miR-3665	CLIP-seq
MIRT1060216	hsa-miR-3681	CLIP-seq
MIRT1060217	hsa-miR-378g	CLIP-seq
MIRT1060218	hsa-miR-4282	CLIP-seq
MIRT1060219	hsa-miR-4320	CLIP-seq
MIRT1060220	hsa-miR-4460	CLIP-seq
MIRT1060221	hsa-miR-4486	CLIP-seq
MIRT1060222	hsa-miR-4651	CLIP-seq
MIRT1060223	hsa-miR-4664-5p	CLIP-seq
MIRT1060224	hsa-miR-4690-5p	CLIP-seq
MIRT1060225	hsa-miR-4727-3p	CLIP-seq
MIRT1060226	hsa-miR-4782-5p	CLIP-seq
MIRT1060227	hsa-miR-526b	CLIP-seq
MIRT1060228	hsa-miR-562	CLIP-seq
MIRT1060229	hsa-miR-599	CLIP-seq
MIRT1060230	hsa-miR-608	CLIP-seq
MIRT1060231	hsa-miR-612	CLIP-seq
MIRT1060232	hsa-miR-764	CLIP-seq
MIRT1060233	hsa-miR-767-5p	CLIP-seq
MIRT2014082	hsa-miR-1260	CLIP-seq
MIRT2014083	hsa-miR-1260b	CLIP-seq
MIRT2014084	hsa-miR-188-3p	CLIP-seq
MIRT2014085	hsa-miR-3156-3p	CLIP-seq
MIRT2014086	hsa-miR-383	CLIP-seq
MIRT2014087	hsa-miR-4301	CLIP-seq
MIRT1060207	hsa-miR-29a	CLIP-seq
MIRT1060208	hsa-miR-29b	CLIP-seq
MIRT1060209	hsa-miR-29c	CLIP-seq
MIRT1060216	hsa-miR-3681	CLIP-seq
MIRT1060219	hsa-miR-4320	CLIP-seq
MIRT1060220	hsa-miR-4460	CLIP-seq
MIRT1060222	hsa-miR-4651	CLIP-seq
MIRT1060225	hsa-miR-4727-3p	CLIP-seq
MIRT1060227	hsa-miR-526b	CLIP-seq
MIRT1060230	hsa-miR-608	CLIP-seq
MIRT1060233	hsa-miR-767-5p	CLIP-seq

Show/Hide all(22)

GO ID	Ontology	Definition	Evidence	Reference
GO:0002376	Process	Immune system process	IEA
GO:0005515	Function	Protein binding	IPI	25416956, 32296183
GO:0005576	Component	Extracellular region	IEA
GO:0005576	Component	Extracellular region	TAS	3136170
GO:0005764	Component	Lysosome	IBA
GO:0005764	Component	Lysosome	IDA	10639150
GO:0005764	Component	Lysosome	IEA
GO:0005764	Component	Lysosome	TAS	3136170
GO:0005829	Component	Cytosol	IDA
GO:0016491	Function	Oxidoreductase activity	IEA
GO:0016667	Function	Oxidoreductase activity, acting on a sulfur group of donors	EXP	10639150, 17142755
GO:0016667	Function	Oxidoreductase activity, acting on a sulfur group of donors	IBA
GO:0016667	Function	Oxidoreductase activity, acting on a sulfur group of donors	IMP	10639150
GO:0016671	Function	Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEA
GO:0019886	Process	Antigen processing and presentation of exogenous peptide antigen via MHC class II	IEA
GO:0019886	Process	Antigen processing and presentation of exogenous peptide antigen via MHC class II	TAS
GO:0030054	Component	Cell junction	IDA
GO:0042590	Process	Antigen processing and presentation of exogenous peptide antigen via MHC class I	IEA
GO:0042590	Process	Antigen processing and presentation of exogenous peptide antigen via MHC class I	ISS
GO:0043202	Component	Lysosomal lumen	TAS
GO:0048147	Process	Negative regulation of fibroblast proliferation	IEA
GO:0050821	Process	Protein stabilization	IEA

MIM	HGNC	e!Ensembl
604664	5398	ENSG00000216490

Protein

UniProt ID

P13284

Protein name

Gamma-interferon-inducible lysosomal thiol reductase (EC 1.8.-.-) (Gamma-interferon-inducible protein IP-30) (Legumaturain)

Protein function

Lysosomal thiol reductase that can reduce protein disulfide bonds. May facilitate the complete unfolding of proteins destined for lysosomal degradation. Plays an important role in antigen processing. Facilitates the generation of MHC class II-re

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF03227	GILT	63 → 166	Gamma interferon inducible lysosomal thiol reductase (GILT)	Family

Sequence

MTLSPLLLFLPPLLLLLDVPTAAVQASPLQALDFFGNGPPVNYKTGNLYLRGPLKKSNAP
LVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHG
EEECKFNKVEACVLDELDMELAFLTIVCMEEFEDMERSLPLCLQLYAPGLSPDTIMECAM
GDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPLEDQTQLLTLVCQLYQGKKPDVCPSS
TSSLRSVCFK

Sequence length

250

Interactions

View interactions

	KEGG		Reactome
	Antigen processing and presentation		MHC class II antigen presentation Interferon gamma signaling

Show/Hide Unknown Diseases (1)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Multiple Sclerosis	Multiple sclerosis	N/A	N/A	GWAS

Show/Hide Text Mining Associations (18)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Adenocarcinoma of Lung	Associate	37784035
Breast Neoplasms	Associate	25333930
COVID 19	Associate	39308856
Glioblastoma	Associate	16947022, 35436915, 39925804
Glioblastoma	Stimulate	32969157
Glioma	Associate	32969157, 35436915, 37408388
Inflammation	Associate	34558849
Lewy Body Disease	Associate	15550490
Melanoma	Associate	12021307, 28857256, 31591149, 35162988
Melanoma	Stimulate	26930048
Neoplasms	Associate	12021307, 18343923, 25333930, 28857256, 37784035, 39925804
Neoplasms	Inhibit	37408388
Nephrotic Syndrome	Associate	35173708
Nevus	Stimulate	31591149
Non alcoholic Fatty Liver Disease	Associate	35654975
Prostatic Neoplasms	Associate	36499557
Restless Legs Syndrome	Associate	18193462
Stomach Neoplasms	Associate	37215115

IFI30 (IFI30 lysosomal thiol reductase)