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Gene Gene information from NCBI Gene database.
Entrez ID 7535
Gene name Zeta chain of T cell receptor associated protein kinase 70
Gene symbol ZAP70
Synonyms (NCBI Gene)
ADMIO2IMD48SRKSTCDSTDTZKZAP-70
Chromosome 2
Chromosome location 2q11.2
Summary This gene encodes an enzyme belonging to the protein tyrosine kinase family, and it plays a role in T-cell development and lymphocyte activation. This enzyme, which is phosphorylated on tyrosine residues upon T-cell antigen receptor (TCR) stimulation, fun
SNPs SNP information provided by dbSNP.
18 Show/Hide all (18)
SNP ID Visualize variation Clinical significance Consequence
rs104893674 C>A Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs113994172 C>A Pathogenic Non coding transcript variant, genic upstream transcript variant, coding sequence variant, missense variant
rs113994173 G>A Pathogenic Intron variant, 5 prime UTR variant
rs113994174 C>T Pathogenic Non coding transcript variant, coding sequence variant, missense variant
rs113994175 A>T Pathogenic Non coding transcript variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
14 Show/Hide all (14)
miRTarBase ID miRNA Experiments Reference
MIRT005760 hsa-miR-34a-5p ImmunoblotLuciferase reporter assay 21205967
MIRT005760 hsa-miR-34a-5p ImmunoblotLuciferase reporter assay 21205967
MIRT005760 hsa-miR-34a-5p ImmunoblotLuciferase reporter assay 21205967
MIRT005761 hsa-miR-34b-3p ImmunoblotLuciferase reporter assay 21205967
MIRT005761 hsa-miR-34b-3p ImmunoblotLuciferase reporter assay 21205967
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
CREM Unknown 16237091
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
70 Show/Hide all (70)
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0001772 Component Immunological synapse IEA
GO:0001784 Function Phosphotyrosine residue binding IEA
GO:0002250 Process Adaptive immune response IEA
GO:0002250 Process Adaptive immune response TAS 20135127
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
176947 12858 ENSG00000115085
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P43403
Protein name Tyrosine-protein kinase ZAP-70 (EC 2.7.10.2) (70 kDa zeta-chain associated protein) (Syk-related tyrosine kinase)
Protein function Tyrosine kinase that plays an essential role in regulation of the adaptive immune response. Regulates motility, adhesion and cytokine expression of mature T-cells, as well as thymocyte development. Also contributes to the development and activat
PDB 1FBV , 1M61 , 1U59 , 2CBL , 2OQ1 , 2OZO , 2Y1N , 3ZNI , 4A4B , 4A4C , 4K2R , 4XZ0 , 4XZ1 , 5O76 , 7SIY
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00017 SH2 163 → 239 SH2 domain Domain
PF00017 SH2 10 → 87 SH2 domain Domain
PF07714 PK_Tyr_Ser-Thr 338 → 593 Protein tyrosine and serine/threonine kinase Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in T- and natural killer cells. Also present in early thymocytes and pro/pre B-cells. {ECO:0000269|PubMed:1423621, ECO:0000269|PubMed:16467082, ECO:0000269|PubMed:9378960}.
Sequence
Sequence length 619
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Ras signaling pathway Translocation of ZAP-70 to Immunological synapse
NF-kappa B signaling pathway Generation of second messenger molecules
Natural killer cell mediated cytotoxicity  
Th1 and Th2 cell differentiation  
Th17 cell differentiation  
T cell receptor signaling pathway  
Yersinia infection  
PD-L1 expression and PD-1 checkpoint pathway in cancer  
Primary immunodeficiency  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
24
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Autoimmune disease, multisystem, infantile-onset, 2 Pathogenic; Likely pathogenic rs869025224, rs113994174 RCV000233631
RCV006272083
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Combined immunodeficiency Pathogenic rs869025224, rs1573262398 RCV000208547
RCV001027642
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Combined immunodeficiency due to ZAP70 deficiency Pathogenic; Likely pathogenic rs1263533157, rs201207626, rs2104688189, rs754420169, rs750794851, rs1677953034, rs869025224, rs2482690458, rs730880318, rs104893674, rs730880319, rs2482741381, rs2482766787, rs2482756016, rs113994174
View all (5 more)
RCV006271754
RCV001731179
RCV006271800
RCV006271813
RCV006271795
View all (15 more)
★★★★★
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Severe combined immunodeficiency disease Pathogenic; Likely pathogenic rs730880318, rs113994174, rs1573261820 RCV005406742
RCV004566794
RCV003486934
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
ZAP70-related disorder Pathogenic rs730880318 RCV003390681
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (19)
Phenotype Name Clinical Significance Source Reference Evidence Score
Acute myeloid leukemia Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ALZHEIMER DISEASE — GWAS catalog 26993346
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COLORECTAL CANCER — GWAS catalog 29228715, 38872215
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
COMBINED IMMUNODEFICIENCY DISEASE — Disgenet —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (186)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 15996927, 16160012, 27686375
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Acute Lymphocytic Leukemia Lymphocytic Leukemia BEFREE 16160012
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Diffuse Large B-Cell Lymphoma B-cell Lymphoma BEFREE 16280661
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Hodgkin Lymphoma Hodgkin Lymphoma BEFREE 15133473
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Oligodendroglioma Oligodendroglioma BEFREE 8957092
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult T-Cell Lymphoma/Leukemia T-Cell Lymphoma/Leukemia BEFREE 8920891
★★★★★
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 26059363 Associate
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Alzheimer`s Disease Alzheimer disease GWASCAT_DG 26993346
★★★★★
★☆☆☆☆
Found in Text Mining only
Anemia Hemolytic Autoimmune Autoimmune hemolytic anemia Pubtator 20575031 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Angioimmunoblastic Lymphadenopathy Angioimmunoblastic T-cell lymphoma BEFREE 15133473
★★★★★
★☆☆☆☆
Found in Text Mining only