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Gene Gene information from NCBI Gene database.
Entrez ID 54539
Gene name NADH:ubiquinone oxidoreductase subunit B11
Gene symbol NDUFB11
Synonyms (NCBI Gene)
CI-ESSSESSSMC1DN30NP17.3Np15P17.3
Chromosome X
Chromosome location Xp11.3
Summary The protein encoded by this gene is a subunit of the multisubunit NADH:ubiquinone oxidoreductase (complex I). Mammalian complex I is located at the mitochondrial inner membrane. This protein has NADH dehydrogenase activity and oxidoreductase activity. It
SNPs SNP information provided by dbSNP.
4
SNP ID Visualize variation Clinical significance Consequence
rs786205225 G>A Likely-pathogenic, pathogenic Stop gained, coding sequence variant
rs876657384 C>- Pathogenic Frameshift variant, coding sequence variant
rs1057519073 C>T Pathogenic Missense variant, coding sequence variant
rs1556760664 A>T Likely-pathogenic Missense variant, coding sequence variant, splice donor variant
miRNA miRNA information provided by mirtarbase database.
29 Show/Hide all (29)
miRTarBase ID miRNA Experiments Reference
MIRT030059 hsa-miR-26b-5p Microarray 19088304
MIRT037342 hsa-miR-877-5p CLASH 23622248
MIRT1178949 hsa-miR-1909 CLIP-seq
MIRT1178950 hsa-miR-3157-5p CLIP-seq
MIRT1178951 hsa-miR-4494 CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
12 Show/Hide all (12)
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 25416956, 31206022, 32296183, 33961781
GO:0005739 Component Mitochondrion HTP 34800366
GO:0005739 Component Mitochondrion IDA 31206022
GO:0005739 Component Mitochondrion IEA
GO:0005743 Component Mitochondrial inner membrane IDA 28844695
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
300403 20372 ENSG00000147123
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9NX14
Protein name NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (Complex I-ESSS) (CI-ESSS) (NADH-ubiquinone oxidoreductase ESSS subunit) (Neuronal protein 17.3) (Np17.3) (p17.3)
Protein function Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediat
PDB 5XTC , 5XTD , 5XTH , 5XTI
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF10183 ESSS 22 → 141 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) Family
Tissue specificity TISSUE SPECIFICITY: Ubiquitous.
Sequence
Sequence length 153
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Oxidative phosphorylation Respiratory electron transport
Metabolic pathways Complex I biogenesis
Thermogenesis  
Retrograde endocannabinoid signaling  
Non-alcoholic fatty liver disease  
Alzheimer disease  
Parkinson disease  
Amyotrophic lateral sclerosis  
Huntington disease  
Prion disease  
Pathways of neurodegeneration - multiple diseases  
Chemical carcinogenesis - reactive oxygen species  
Diabetic cardiomyopathy  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
13
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Show/Hide Causal Diseases (7)
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Histiocytoid cardiomyopathy Pathogenic rs786205225 RCV000240620
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Linear skin defects with multiple congenital anomalies 1 Pathogenic rs786205225 RCV000763626
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Linear skin defects with multiple congenital anomalies 3 Pathogenic; Likely pathogenic rs786205225, rs876657384, rs2520209894, rs1556760603, rs1057519073 RCV000170490
RCV000170491
RCV006257375
RCV003335968
RCV005044624
★★★★★
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Mitochondrial complex I deficiency, nuclear type 1 Pathogenic rs786205225 RCV000763626
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Mitochondrial complex I deficiency, nuclear type 30 Likely pathogenic; Pathogenic rs2520209863, rs2520209894, rs1057519073 RCV002468751
RCV005416136
RCV000412600
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (6)
Phenotype Name Clinical Significance Source Reference Evidence Score
MICROPHTHALMIA WITH LINEAR SKIN DEFECTS SYNDROME — Orphanet 25772934
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MICROPHTHALMIA, SYNDROMIC 7 — CTD, Disgenet
CTD, Disgenet
—
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MITOCHONDRIAL COMPLEX I DEFICIENCY — Disgenet —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MITOCHONDRIAL DISEASE — ClinGen, Disgenet 25772934, 25921236, 26741492, 27102574, 27488349, 27509854, 28050600, 30423443
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
MITOCHONDRIAL DISEASES — Disgenet, ClinGen ClinGen report
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (102)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Absence of septum pellucidum Absence Of Septum Pellucidum HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Agenesis of corpus callosum Agenesis Of Corpus Callosum HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Ambiguous Genitalia Ambiguous Genitalia HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Anemia Anemia Pubtator 27488349 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Anemia Sideroblastic Sideroblastic anemia Pubtator 27488349 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Anophthalmos Syndromic microphthalmia HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Anus, Imperforate Imperforate anus HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Aphasia Aphasia HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Atherosclerosis Pubtator 37642954, 37986300 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Atresia of nasolacrimal duct Atresia Of Nasolacrimal Duct HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only