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Gene Gene information from NCBI Gene database.
Entrez ID 10434
Gene name Lysophospholipase 1
Gene symbol LYPLA1
Synonyms (NCBI Gene)
APT-1APT1LPL-ILPL1hAPT1
Chromosome 8
Chromosome location 8q11.23
Summary This gene encodes a member of the alpha/beta hydrolase superfamily. The encoded protein functions as a homodimer, exhibiting both depalmitoylating as well as lysophospholipase activity, and may be involved in Ras localization and signaling. Alternate spli
miRNA miRNA information provided by mirtarbase database.
434 Show/Hide all (434)
miRTarBase ID miRNA Experiments Reference
MIRT047071 hsa-miR-183-5p CLASH 23622248
MIRT045770 hsa-miR-125a-5p CLASH 23622248
MIRT437682 hsa-miR-222-3p MicroarrayqRT-PCR 22815788
MIRT641173 hsa-miR-495-3p HITS-CLIP 23824327
MIRT641172 hsa-miR-5688 HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
40 Show/Hide all (40)
GO ID Ontology Definition Evidence Reference
GO:0002084 Process Protein depalmitoylation IDA 19439193
GO:0002084 Process Protein depalmitoylation IMP 27481942
GO:0004620 Function Phospholipase activity IDA 21393252
GO:0004622 Function Phosphatidylcholine lysophospholipase activity IDA 19439193, 21393252
GO:0004622 Function Phosphatidylcholine lysophospholipase activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
605599 6737 ENSG00000120992
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O75608
Protein name Acyl-protein thioesterase 1 (APT-1) (hAPT1) (EC 3.1.2.-) (Lysophospholipase 1) (Lysophospholipase I) (LPL-I) (LysoPLA I) (Palmitoyl-protein hydrolase) (EC 3.1.2.22)
Protein function Acts as an acyl-protein thioesterase (PubMed:19439193, PubMed:20418879). Hydrolyzes fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS (PubMed:20418879). Acts as a palmitoyl thioesterase that cata
PDB 1FJ2 , 5SYM , 6QGN , 6QGO , 6QGQ , 6QGS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02230 Abhydrolase_2 8 → 226 Phospholipase/Carboxylesterase Domain
Tissue specificity TISSUE SPECIFICITY: Platelets. {ECO:0000269|PubMed:21393252}.
Sequence
Sequence length 230
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Glycerophospholipid metabolism eNOS activation
Choline metabolism in cancer  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
2
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Reference Evidence Score
Lung cancer Likely benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Malignant tumor of esophagus Likely benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (16)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Arteriosclerosis Arteriosclerosis BEFREE 12032161
★★★★★
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Atherosclerosis BEFREE 12032161
★★★★★
★☆☆☆☆
Found in Text Mining only
Autoimmune Lymphoproliferative Syndrome Autoimmune Lymphoproliferative Disorder BEFREE 10090885
★★★★★
★☆☆☆☆
Found in Text Mining only
Carcinoma Carcinoma BEFREE 28224267
★★★★★
★☆☆☆☆
Found in Text Mining only
Diabetes Diabetes BEFREE 12032161
★★★★★
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus Diabetes Mellitus BEFREE 12032161
★★★★★
★☆☆☆☆
Found in Text Mining only
Diabetes Mellitus, Non-Insulin-Dependent Diabetes Mellitus BEFREE 29374012
★★★★★
★☆☆☆☆
Found in Text Mining only
Malignant Neoplasms Malignant Neoplasm BEFREE 28224267, 29648538
★★★★★
★☆☆☆☆
Found in Text Mining only
Melanoma Melanoma Pubtator 25944911, 26771141, 29648538 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
melanoma Melanoma BEFREE 28614908, 29648538
★★★★★
★☆☆☆☆
Found in Text Mining only