Log in to save this analysis

Save This Analysis

Gene Gene information from NCBI Gene database.
Entrez ID 8335
Gene name H2A clustered histone 4
Gene symbol H2AC4
Synonyms (NCBI Gene)
H2A/mH2AC8H2AFMHIST1H2AB
Chromosome 6
Chromosome location 6p22.2
Summary Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. This structure consists of approximately 146 bp of DNA wrapped around a nucleosome, an octamer composed of pairs of each of the f
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
20 Show/Hide all (20)
GO ID Ontology Definition Evidence Reference
GO:0000786 Component Nucleosome IBA
GO:0000786 Component Nucleosome IEA
GO:0000786 Component Nucleosome IPI 20498094, 21812398, 26694698
GO:0003677 Function DNA binding IEA
GO:0003677 Function DNA binding NAS 6647026
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602795 4734 ENSG00000278463
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
ATP-dependent chromatin remodeling Recognition and association of DNA glycosylase with site containing an affected purine
Necroptosis Cleavage of the damaged purine
Neutrophil extracellular trap formation Packaging Of Telomere Ends
Alcoholism Formation of the beta-catenin:TCF transactivating complex
Systemic lupus erythematosus PRC2 methylates histones and DNA
  Condensation of Prophase Chromosomes
  Oxidative Stress Induced Senescence
  Senescence-Associated Secretory Phenotype (SASP)
  DNA Damage/Telomere Stress Induced Senescence
  HDACs deacetylate histones
  HATs acetylate histones
  RMTs methylate histone arginines
  SIRT1 negatively regulates rRNA expression
  NoRC negatively regulates rRNA expression
  B-WICH complex positively regulates rRNA expression
  Transcriptional regulation by small RNAs
  Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3
  UCH proteinases
  Ub-specific processing proteases
  Metalloprotease DUBs
  Deposition of new CENPA-containing nucleosomes at the centromere
  RNA Polymerase I Promoter Opening
  RNA Polymerase I Promoter Escape
  RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
  Estrogen-dependent gene expression
  HCMV Early Events
  HCMV Late Events
  Amyloid fiber formation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
1
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Reference Evidence Score
PSORIASIS — GWAS catalog 39885523
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (11)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Arthritis, Gouty Gouty arthritis GWASDB_DG 21768215, 23263486
★★★★★
★☆☆☆☆
Found in Text Mining only
Carcinoma Hepatocellular Hepatocellular carcinoma Pubtator 22690089 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Coronary Artery Disease Coronary artery disease Pubtator 25855937 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Gout Gout GWASDB_DG 21768215, 23263486
★★★★★
★☆☆☆☆
Found in Text Mining only
Juvenile arthritis Arthritis CTD_human_DG 19565504
★★★★★
★☆☆☆☆
Found in Text Mining only
Juvenile psoriatic arthritis Juvenile arthritis CTD_human_DG 19565504
★★★★★
★☆☆☆☆
Found in Text Mining only
Juvenile-Onset Still Disease Still Disease CTD_human_DG 19565504
★★★★★
★☆☆☆☆
Found in Text Mining only
Leukemia, Myelocytic, Acute Leukemia GWASCAT_DG 27903959
★★★★★
★☆☆☆☆
Found in Text Mining only
Polyarthritis, Juvenile, Rheumatoid Factor Negative Seronegative polyarthritis CTD_human_DG 19565504
★★★★★
★☆☆☆☆
Found in Text Mining only
Polyarthritis, Juvenile, Rheumatoid Factor Positive Polyarthritis, Rheumatoid Factor Positive CTD_human_DG 19565504
★★★★★
★☆☆☆☆
Found in Text Mining only