Gene Gene information from NCBI Gene database.
Entrez ID 1737
Gene name Dihydrolipoamide S-acetyltransferase
Gene symbol DLAT
Synonyms (NCBI Gene)
DLTAE2PBCPDC-E2PDCE2
Chromosome 11
Chromosome location 11q23.1
Summary This gene encodes component E2 of the multi-enzyme pyruvate dehydrogenase complex (PDC). PDC resides in the inner mitochondrial membrane and catalyzes the conversion of pyruvate to acetyl coenzyme A. The protein product of this gene, dihydrolipoamide acet
SNPs SNP information provided by dbSNP.
7
SNP ID Visualize variation Clinical significance Consequence
rs138505899 T>G Likely-pathogenic Coding sequence variant, intron variant, 5 prime UTR variant, missense variant, non coding transcript variant
rs140678772 G>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, non coding transcript variant, intron variant, missense variant
rs367875541 G>A Likely-pathogenic Splice acceptor variant
rs781936816 G>A Conflicting-interpretations-of-pathogenicity Synonymous variant, intron variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant
rs782070173 T>C Likely-pathogenic Splice donor variant
miRNA miRNA information provided by mirtarbase database.
184
miRTarBase ID miRNA Experiments Reference
MIRT032242 hsa-let-7b-5p Proteomics 18668040
MIRT047485 hsa-miR-10b-5p CLASH 23622248
MIRT040451 hsa-miR-615-3p CLASH 23622248
MIRT447438 hsa-miR-5192 PAR-CLIP 22100165
MIRT447439 hsa-miR-6731-5p PAR-CLIP 22100165
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
35
GO ID Ontology Definition Evidence Reference
GO:0004742 Function Dihydrolipoyllysine-residue acetyltransferase activity IBA
GO:0004742 Function Dihydrolipoyllysine-residue acetyltransferase activity IDA 9045657, 9242632, 20160912
GO:0004742 Function Dihydrolipoyllysine-residue acetyltransferase activity IEA
GO:0004742 Function Dihydrolipoyllysine-residue acetyltransferase activity NAS 3191998
GO:0004742 Function Dihydrolipoyllysine-residue acetyltransferase activity TAS
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
608770 2896 ENSG00000150768
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P10515
Protein name Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial (EC 2.3.1.12) (70 kDa mitochondrial autoantigen of primary biliary cirrhosis) (PBC) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrog
Protein function As part of the pyruvate dehydrogenase complex, catalyzes the transfers of an acetyl group to a lipoic acid moiety (Probable). The pyruvate dehydrogenase complex, catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2), and thereby l
PDB 1FYC , 1Y8N , 1Y8O , 1Y8P , 2DNE , 2PNR , 2Q8I , 3B8K , 3CRK , 3CRL , 6CT0 , 6H55 , 8PIU
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00364 Biotin_lipoyl 92 165 Biotin-requiring enzyme Domain
PF00364 Biotin_lipoyl 219 293 Biotin-requiring enzyme Domain
PF02817 E3_binding 355 390 e3 binding domain Family
PF00198 2-oxoacid_dh 417 647 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Domain
Sequence
Sequence length 647
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
17
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Pancreatic adenocarcinoma Pathogenic rs782185799 RCV005931608
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Pyruvate dehydrogenase E2 deficiency Likely pathogenic; Pathogenic rs1432866316, rs2137679109, rs1862823765, rs1862000857, rs782029228, rs782185799, rs782225633, rs2498425963, rs367875541, rs782704553, rs781991355 RCV001844333
RCV000002190
RCV003498718
RCV003603261
RCV003603203
View all (6 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Cervical cancer Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cholangiocarcinoma Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DLAT-related disorder Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Familial cancer of breast Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adrenoleukodystrophy Adrenoleukodystrophy BEFREE 28834158
★☆☆☆☆
Found in Text Mining only
Angioimmunoblastic Lymphadenopathy Angioimmunoblastic T-cell lymphoma BEFREE 27170385
★☆☆☆☆
Found in Text Mining only
Ankylosing spondylitis Ankylosing Spondylitis BEFREE 20952467
★☆☆☆☆
Found in Text Mining only
Arthritis Psoriatic Psoriatic arthritis Pubtator 16622521 Associate
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 37547319 Associate
★☆☆☆☆
Found in Text Mining only
Arthritis, Psoriatic Psoriatic Arthritis BEFREE 16622521
★☆☆☆☆
Found in Text Mining only
Autoimmune Chronic Hepatitis Autoimmune hepatitis BEFREE 19012040, 29511554
★☆☆☆☆
Found in Text Mining only
Autoimmune Diseases Autoimmune Diseases BEFREE 11344867, 28100006
★☆☆☆☆
Found in Text Mining only
Bile duct carcinoma Bile duct carcinoma BEFREE 12108679
★☆☆☆☆
Found in Text Mining only
Biliary cirrhosis Biliary cirrhosis LHGDN 12395322, 17068145
★☆☆☆☆
Found in Text Mining only