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Gene Gene information from NCBI Gene database.
Entrez ID 23283
Gene name Cleavage stimulation factor subunit 2 tau variant
Gene symbol CSTF2T
Synonyms (NCBI Gene)
CstF-64T
Chromosome 10
Chromosome location 10q21.1
miRNA miRNA information provided by mirtarbase database.
412 Show/Hide all (412)
miRTarBase ID miRNA Experiments Reference
MIRT019281 hsa-miR-148b-3p Microarray 17612493
MIRT021731 hsa-miR-132-3p Microarray 17612493
MIRT024141 hsa-miR-221-3p Sequencing 20371350
MIRT051741 hsa-let-7c-5p CLASH 23622248
MIRT049824 hsa-miR-92a-3p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
11 Show/Hide all (11)
GO ID Ontology Definition Evidence Reference
GO:0003676 Function Nucleic acid binding IEA
GO:0003723 Function RNA binding HDA 22658674, 22681889
GO:0003723 Function RNA binding IEA
GO:0003729 Function MRNA binding IBA
GO:0005515 Function Protein binding IPI 16189514, 25416956, 32296183
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
611968 17086 ENSG00000177613
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9H0L4
Protein name Cleavage stimulation factor subunit 2 tau variant (CF-1 64 kDa subunit tau variant) (Cleavage stimulation factor 64 kDa subunit tau variant) (CSTF 64 kDa subunit tau variant) (TauCstF-64)
Protein function May play a significant role in AAUAAA-independent mRNA polyadenylation in germ cells. Directly involved in the binding to pre-mRNAs (By similarity).
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00076 RRM_1 18 → 88 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Domain
PF14304 CSTF_C 572 → 612 Transcription termination and cleavage factor C-terminal Domain
PF14327 CSTF2_hinge 112 → 191 Hinge domain of cleavage stimulation factor subunit 2 Family
Sequence
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALR
VDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKIL
HRKIHVTPLIPGKSQSVSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQ
HLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGAGPGSLTPGGAMQPQLGMPGVGPVPL
ERGQVQMSDPRAPIPRGPVTPGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQ
GPPMHHASGHDTRGPSSHEMRGGPLGDPRLLIGEPRGPMIDQRGLPMDGRGGRDSRAMET
RAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRGPVPSSRGPMTGGIQGPGP
INIGAGGPPQGPRQVPGISGVGNPGAGMQGTGIQGTGMQGAGIQGGGMQGAGIQGVSIQG
GGIQGGGIQGASKQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQ
SILILKEQIQKS
TGAS
Sequence length 616
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
mRNA surveillance pathway mRNA Splicing - Major Pathway
  mRNA 3'-end processing
  RNA Polymerase II Transcription Termination
  Processing of Intronless Pre-mRNAs