Log in to bookmark this gene

Bookmark This Gene

Gene Gene information from NCBI Gene database.
Entrez ID 64581
Gene name C-type lectin domain containing 7A
Gene symbol CLEC7A
Synonyms (NCBI Gene)
BGRCANDF4CD369CLECSF12DECTIN1SCARE2
Chromosome 12
Chromosome location 12p13.2
Summary This gene encodes a member of the C-type lectin/C-type lectin-like domain (CTL/CTLD) superfamily. The encoded glycoprotein is a small type II membrane receptor with an extracellular C-type lectin-like domain fold and a cytoplasmic domain with an immunorec
miRNA miRNA information provided by mirtarbase database.
344 Show/Hide all (344)
miRTarBase ID miRNA Experiments Reference
MIRT711136 hsa-miR-4777-3p HITS-CLIP 19536157
MIRT711135 hsa-miR-4768-5p HITS-CLIP 19536157
MIRT711134 hsa-miR-6833-3p HITS-CLIP 19536157
MIRT711133 hsa-miR-6809-3p HITS-CLIP 19536157
MIRT711136 hsa-miR-4777-3p HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
95 Show/Hide all (95)
GO ID Ontology Definition Evidence Reference
GO:0001775 Process Cell activation ISS
GO:0001872 Function (1->3)-beta-D-glucan binding IBA
GO:0001872 Function (1->3)-beta-D-glucan binding IDA 22267217, 24721111
GO:0001872 Function (1->3)-beta-D-glucan binding IEA
GO:0001872 Function (1->3)-beta-D-glucan binding ISS
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
606264 14558 ENSG00000172243
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9BXN2
Protein name C-type lectin domain family 7 member A (Beta-glucan receptor) (C-type lectin superfamily member 12) (Dendritic cell-associated C-type lectin 1) (DC-associated C-type lectin 1) (Dectin-1) (CD antigen CD369)
Protein function Lectin that functions as a pattern recognizing receptor (PRR) specific for beta-1,3-linked and beta-1,6-linked glucans, which constitute cell wall constituents from pathogenic bacteria and fungi (PubMed:11567029, PubMed:12423684). Necessary for
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00059 Lectin_C 137 → 243 Lectin C-type domain Domain
Tissue specificity TISSUE SPECIFICITY: Highly expressed in peripheral blood leukocytes and dendritic cells. Detected in spleen, bone marrow, lung, muscle, stomach and placenta. {ECO:0000269|PubMed:11470510, ECO:0000269|PubMed:11491532, ECO:0000269|PubMed:11567029, ECO:00002
Sequence
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWRLIAVILGILCLVILVI
AVVLGTMAIWRSNSGSNTLENGYFLSRNKENHSQPTQSSLEDSVTPTKAVKTTGVLSSPC
PPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFW
IGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSI
CEK
KFSM
Sequence length 247
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Phagosome CLEC7A (Dectin-1) signaling
Neutrophil extracellular trap formation  
C-type lectin receptor signaling pathway  
Tuberculosis  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
3
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Reference Evidence Score
Aspergillosis, susceptibility to Benign; Likely benign; Uncertain significance ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CLEC7A-related disorder Benign; Likely benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Familial chronic mucocutaneous candidiasis Uncertain significance; Benign; Likely benign ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (71)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Amyloidosis Amyloidosis BEFREE 30283032
★★★★★
★☆☆☆☆
Found in Text Mining only
Arteriosclerosis Arteriosclerosis BEFREE 30431070, 30775441
★★★★★
★☆☆☆☆
Found in Text Mining only
Arthritis Arthritis BEFREE 28948613
★★★★★
★☆☆☆☆
Found in Text Mining only
Arthritis Psoriatic Psoriatic arthritis Pubtator 20631729 Stimulate
★★★★★
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Rheumatoid arthritis Pubtator 20158887 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Asperger Syndrome Asperger syndrome Pubtator 26352598 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Asthma Asthma BEFREE 29431076, 29475849
★★★★★
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Atherosclerosis BEFREE 30431070, 30775441
★★★★★
★☆☆☆☆
Found in Text Mining only
Autism Spectrum Disorder Autism Pubtator 26352598 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Autism Spectrum Disorders Autism Spectrum Disorder BEFREE 26352598, 30870518
★★★★★
★☆☆☆☆
Found in Text Mining only