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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Nephrotic syndrome X-linked nephrolithiasis
1 gene
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1 of 1 corroborated by 2+ sources
CLCN5(2)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Aica-ribosiduria Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ATIC(2)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Alanine-glyoxylate aminotransferase deficiency Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AGXT(3)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Nephrotic syndrome nephrotic syndrome, type 13
1 gene
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1 of 1 corroborated by 2+ sources
NUP205(6)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Nephrotic syndrome nephrotic syndrome, type 18
1 gene
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1 of 1 corroborated by 2+ sources
NUP133(5)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome nephrotic syndrome, type 19
1 gene
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1 of 1 corroborated by 2+ sources
NUP160(5)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome nephrotic syndrome, type 20
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D8B(5)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome nephrotic syndrome, type 21
1 gene
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1 of 1 corroborated by 2+ sources
AVIL(5)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Nephrotic syndrome nephrotic syndrome, type 8
1 gene
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1 of 1 corroborated by 2+ sources
ARHGDIA(6)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome Ocular cystinosis
1 gene
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1 of 1 corroborated by 2+ sources
CTNS(4)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
atypical hemolytic-uremic syndrome with DGKE deficiency Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DGKE(4)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Biotin-thiamine-responsive basal ganglia disease Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC19A3(4)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
ehlers-danlos syndrome, musculocontractural type 2 Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DSE(2)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
COG1-congenital disorder of glycosylation Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
COG1(2)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
methylmalonic aciduria and homocystinuria Skin cancer
1 gene
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1 of 1 corroborated by 2+ sources
ZNF143(2)
0.012 0.500 1.08e-2 1.21e-2 ✓ sig. —
Neuroocular syndrome Skin cancer
1 gene
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1 of 1 corroborated by 2+ sources
PRR12(5)
0.012 0.500 1.08e-2 1.21e-2 ✓ sig. —
Carcinoma Chromosome 5q deletion syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RPS14(2)
0.006 1.000 1.07e-2 1.21e-2 ✓ sig. —
Carcinoma inherited glutathione synthetase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
GSS(2)
0.006 1.000 1.07e-2 1.21e-2 ✓ sig. —
Carcinoma Pemphigus foliaceus
1 gene
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1 of 1 corroborated by 2+ sources
RAN(2)
0.006 1.000 1.07e-2 1.21e-2 ✓ sig. —
Carcinoma Wernicke encephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
TKT(2)
0.006 1.000 1.07e-2 1.21e-2 ✓ sig. —
Carcinoma macrothrombocytopenia-lymphedema-developmental delay-facial dysmorphism-camptodactyly syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CDC42(2)
0.006 1.000 1.07e-2 1.21e-2 ✓ sig. —
Carcinoma MERTK-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
MERTK(2)
0.006 1.000 1.07e-2 1.21e-2 ✓ sig. —
Carcinoma Hyperprolactinemia
1 gene
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1 of 1 corroborated by 2+ sources
PRLR(5)
0.006 1.000 1.07e-2 1.21e-2 ✓ sig. —
Cirrhosis Necrosis
1 gene
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1 of 1 corroborated by 2+ sources
KRT18(4)
0.017 0.333 1.07e-2 1.21e-2 ✓ sig. —
Bronchopneumonia Peripheral vascular disease
1 gene
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SERTM1(1)
0.026 0.200 1.07e-2 1.20e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.