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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Amyotrophic lateral sclerosis Vertical talus
1 gene
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1 of 1 corroborated by 2+ sources
HOXD10(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Xerosis with immune and pulmonary dysfunction syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DBR1(5)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Xgip syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DBR1(2)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
12q15q21 microdeletion syndrome Amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
CNOT2(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
3-hydroxyacyl-coa dehydrogenase deficiency Amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
HADH(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Adult-onset proximal spinal muscular atrophy Amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
VAPB(7)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
ALS2-related motor neuron disease Amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
ALS2(8)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis 26 with or without frontotemporal dementia
1 gene
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1 of 1 corroborated by 2+ sources
TIA1(5)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 15
1 gene
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1 of 1 corroborated by 2+ sources
UBQLN2(7)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 18
1 gene
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1 of 1 corroborated by 2+ sources
PFN1(7)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 23
1 gene
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1 of 1 corroborated by 2+ sources
ANXA11(6)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 8
1 gene
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1 of 1 corroborated by 2+ sources
VAPB(7)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 9
1 gene
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1 of 1 corroborated by 2+ sources
ANG(8)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Congenital arthrogryposis with anterior horn cell disease
1 gene
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1 of 1 corroborated by 2+ sources
GLE1(5)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Cystinosis Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CTNS(6)
0.006 0.500 2.14e-2 2.33e-2 ✓ sig. —
Basal cell carcinoma histidinemia
1 gene
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1 of 1 corroborated by 2+ sources
HAL(2)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. Cluster 29 →
Basal cell carcinoma progressive essential tremor-speech impairment-facial dysmorphism-intellectual disability-abnormal behavior syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC6A17(2)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. Cluster 29 →
Basal cell carcinoma RAB28-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RAB28(2)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Anterior maxillary protrusion-strabismus-intellectual disability syndrome Basal cell carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
SOBP(3)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Basal cell carcinoma Intellectual disability, anterior maxillary protrusion, and strabismus
1 gene
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1 of 1 corroborated by 2+ sources
SOBP(3)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Basal cell carcinoma xeroderma pigmentosum group A
1 gene
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1 of 1 corroborated by 2+ sources
XPA(2)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Basal cell carcinoma Developmental delay with hypotonia and impaired language
1 gene
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1 of 1 corroborated by 2+ sources
FBXW7(5)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Basal cell carcinoma Enteropathy
1 gene
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1 of 1 corroborated by 2+ sources
SLCO2A1(3)
0.003 1.000 2.12e-2 2.31e-2 ✓ sig. —
Diabetic retinopathy Thyroid hemiagenesis
1 gene
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1 of 1 corroborated by 2+ sources
VPS13C(2)
0.006 0.500 2.12e-2 2.30e-2 ✓ sig. —
Male infertility round headed spermatozoa Rolandic epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
DPY19L2(2)
0.019 0.143 2.12e-2 2.30e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.