Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Gaucher disease due to saposin C deficiency Krabbe disease due to saposin A deficiency
1 gene
Show details
PSAP(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 118 →
Genetic hyperferritinemia without iron overload hereditary hyperferritinemia with congenital cataracts
1 gene
Show details
1 of 1 corroborated by 2+ sources
FTL(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Genetic hyperferritinemia without iron overload neuroferritinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
FTL(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Genetic renal tubular disease Hypokalemia-hypomagnesemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC12A3(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Giant cell tumor of tendon sheath Renal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HNF1B(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 23 →
Giant cell tumor of tendon sheath Multicystic dysplastic kidney
1 gene
Show details
1 of 1 corroborated by 2+ sources
HNF1B(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 23 →
Glass syndrome Satb2 associated syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SATB2(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
glaucoma 3, primary congenital, d Microspherophakia
1 gene
Show details
1 of 1 corroborated by 2+ sources
LTBP2(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
glomerulopathy with fibronectin deposits 2 spondylometaphyseal dysplasia, 'corner fracture' type
1 gene
Show details
FN1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Glutaminase deficiency infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development
1 gene
Show details
1 of 1 corroborated by 2+ sources
GLS(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Glycerol kinase deficiency inborn glycerol kinase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
GK(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
glycogen storage disease II Glycoprotein storage disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
GAA(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
glycogen storage disorder due to hepatic glycogen synthase deficiency Hepatic glycogen synthase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
GYS2(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Glycoprotein vi deficiency platelet-type bleeding disorder 11
1 gene
Show details
1 of 1 corroborated by 2+ sources
GP6(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
GM3 synthase deficiency Salt and pepper developmental regression syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ST3GAL5(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Granulomatous inflammatory arthritis-dermatitis-uveitis, familial Yao syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NOD2(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 382 →
greenberg dysplasia Reynolds syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LBR(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 280 →
greenberg dysplasia Rhizomelic skeletal dysplasia with or without pelger-huet anomaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
LBR(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 280 →
greenberg dysplasia regressive spondylometaphyseal dysplasia
1 gene
Show details
LBR(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 280 →
greig cephalopolysyndactyly syndrome Tibial hemimelia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GLI3(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 142 →
Growth retardation, developmental delay, and facial dysmorphism Growth retardation, developmental delay, coarse facies, and early death
1 gene
Show details
1 of 1 corroborated by 2+ sources
FTO(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
COL1A1-related Ehlers-Danlos syndrome Maternal hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL1A1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 138 →
COL1A1-related Ehlers-Danlos syndrome Rhizomelia
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL1A1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 138 →
COL1A2-related Ehlers-Danlos syndrome ehlers-danlos syndrome, cardiac valvular type
1 gene
Show details
COL1A2(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
COL1A2-related Ehlers-Danlos syndrome COL1A2-related osteogenesis imperfecta
1 gene
Show details
COL1A2(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.