Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
PAX6-related ocular dysgenesis Tooth abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
PAX6(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 74 →
Ring dermoid of cornea Tooth abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
PITX2(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Carbohydrate metabolism disease Transaldolase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TALDO1(6)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 354 →
Hypertensive heart disease Trichomegaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGF5(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Chromosome 8p23.1 monosomy Tricuspid valve disease
1 gene
Show details
GATA4(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Congenital pulmonary valve atresia Tricuspid valve disease
1 gene
Show details
GATA4(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Martsolf syndrome TUBB3-related tubulinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBB3(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Brachycephaly Turricephaly
1 gene
Show details
ZIC1(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Brachycephaly TWIST1-related craniosynostosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TWIST1(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 127 →
Delirium Tyrosine hydroxylase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TH(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Tooth abnormalities Ulnar-mammary syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX3(6)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 74 →
Headache Vitamin e deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TTPA(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Tricuspid valve disease Waardenburg syndrome type 4B
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDN3(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Septo-optic dysplasia Webb-dattani syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARNT2(6)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 218 →
Perisylvian syndrome Wolfram-like syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
WFS1(7)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Swyer syndrome X-linked adrenal hypoplasia congenita
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR0B1(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Septo-optic dysplasia X-linked congenital generalized hypertrichosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOX3(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Vascular system injury X-linked distal spinal muscular atrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATP7A(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Porphyria X-linked erythropoietic protoporphyria
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALAS2(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Deafness, x-linked X-linked external auditory canal atresia, dilated internal auditory canal, facial dysmorphism syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GPRASP2(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 210 →
Deafness, x-linked X-linked hereditary sensory and autonomic neuropathy with deafness
1 gene
Show details
1 of 1 corroborated by 2+ sources
AIFM1(7)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Omenn syndrome X-linked severe combined immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
IL2RG(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Congenital skin anomaly xeroderma pigmentosum group D
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERCC2(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Skin abnormalities xeroderma pigmentosum group D
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERCC2(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
asphyxiating thoracic dystrophy 3 Saldino-noonan syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DYNC2H1(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.