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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Dopamine beta-hydroxy­lase deficiency Hematologic neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
HSPA5(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Duane-radial ray syndrome Oculopalatosekeletal syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SALL4(6)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Central areolar choroidal dystrophy Dyschromatopsia
1 gene
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EYS(1)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Dyshidrosis Sweat gland disease
1 gene
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TCERG1L(1)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 270 →
Dysphonia Paroxysmal dyskinesia
1 gene
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1 of 1 corroborated by 2+ sources
COMT(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Dysphonia Ptosis
1 gene
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TWNK(1)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Littles disease Seizures, tonic-clonic, photosensitive
1 gene
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1 of 1 corroborated by 2+ sources
KCNJ10(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 58 →
Immune system disorder macrothrombocytopenia, isolated
1 gene
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1 of 1 corroborated by 2+ sources
TRPM7(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 255 →
macrothrombocytopenia, isolated Vacuolar myopathy
1 gene
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1 of 1 corroborated by 2+ sources
GNE(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Butterfly-shaped pigmentary macular dystrophy Malignant peripheral nerve sheath tumor
1 gene
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1 of 1 corroborated by 2+ sources
HTRA1(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Butterfly-shaped pigmentary macular dystrophy Malignant triton tumor
1 gene
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1 of 1 corroborated by 2+ sources
HTRA1(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Intestinal hypomagnesemia Magnesium metabolism disorder
1 gene
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1 of 1 corroborated by 2+ sources
TRPM6(3)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 341 →
Congenital short qt syndrome Jervell and lange-nielsen syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KCNQ1(7)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Cantu syndrome Kleefstra syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ABCC9(4)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 234 →
Bronchus cancer Large cell carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
CYP2A6(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 294 →
Large cell carcinoma Respiratory system cancer
1 gene
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1 of 1 corroborated by 2+ sources
CYP2A6(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 294 →
Cerebellar malformation Coach syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TMEM67(5)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 306 →
Cerebral saccular aneurysm juvenile polyposis syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ENG(3)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Chediak-higashi syndrome Facioscapulohumeral muscular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
SMCHD1(5)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. Cluster 313 →
Childhood-onset spinal muscular atrophy Rhizomelic chondrodysplasia punctata
1 gene
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1 of 1 corroborated by 2+ sources
DYNC1H1(3)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Cholesteatoma Vaginal neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
IL2(2)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Cholesteatoma Coagulation factor deficiency syndrome
1 gene
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F13B(1)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Cholesteatoma Congenital factor xiii deficiency
1 gene
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1 of 1 corroborated by 2+ sources
F13B(3)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Cholesteatoma Factor xiii deficiency
1 gene
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1 of 1 corroborated by 2+ sources
F13B(6)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —
Chorioretinal atrophy Choroideremia
1 gene
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1 of 1 corroborated by 2+ sources
CHM(7)
0.143 0.500 6.49e-4 1.24e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.