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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Gout pyruvate kinase deficiency of red cells
1 gene
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1 of 1 corroborated by 2+ sources
PKLR(2)
0.001 1.000 5.32e-2 5.48e-2 —
Gout Partial hypoxanthine-guanine phosphoribosyltransferase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HPRT1(3)
0.001 1.000 5.32e-2 5.48e-2 —
Gout neurodevelopmental disorder with spasticity, cataracts, and cerebellar hypoplasia
1 gene
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1 of 1 corroborated by 2+ sources
MED27(2)
0.001 1.000 5.32e-2 5.48e-2 —
Gout obsolete glaucoma 1, open angle, F
1 gene
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1 of 1 corroborated by 2+ sources
ASB10(2)
0.001 1.000 5.32e-2 5.48e-2 —
Gout Osteomalacia
1 gene
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1 of 1 corroborated by 2+ sources
MEPE(3)
0.001 1.000 5.32e-2 5.48e-2 —
Gout GPR161-related medulloblastoma predisposition
1 gene
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1 of 1 corroborated by 2+ sources
GPR161(2)
0.001 1.000 5.32e-2 5.48e-2 —
GNAT2-related retinopathy Gout
1 gene
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1 of 1 corroborated by 2+ sources
GNAT2(2)
0.001 1.000 5.32e-2 5.48e-2 —
glycogen storage disease V Gout
1 gene
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1 of 1 corroborated by 2+ sources
PYGM(2)
0.001 1.000 5.32e-2 5.48e-2 —
glycogen storage disease I Gout
1 gene
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1 of 1 corroborated by 2+ sources
G6PC1(2)
0.001 1.000 5.32e-2 5.48e-2 —
Gout lesch-nyhan syndrome
1 gene
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1 of 1 corroborated by 2+ sources
HPRT1(3)
0.001 1.000 5.32e-2 5.48e-2 —
Gout leukoencephalopathy with vanishing white matter 4
1 gene
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1 of 1 corroborated by 2+ sources
EIF2B4(2)
0.001 1.000 5.32e-2 5.48e-2 —
Gout meier-gorlin syndrome 2
1 gene
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1 of 1 corroborated by 2+ sources
ORC4(2)
0.001 1.000 5.32e-2 5.48e-2 —
B4GALT1-congenital disorder of glycosylation Gout
1 gene
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1 of 1 corroborated by 2+ sources
B4GALT1(2)
0.001 1.000 5.32e-2 5.48e-2 —
Dalmatian hypouricemia Gout
1 gene
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1 of 1 corroborated by 2+ sources
0.001 1.000 5.32e-2 5.48e-2 —
Congenital plasmin inhibitor deficiency Gout
1 gene
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1 of 1 corroborated by 2+ sources
0.001 1.000 5.32e-2 5.48e-2 —
Dentici novelli neurodevelopmental syndrome Intellectual developmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
ZNF526(4)
0.001 1.000 5.25e-2 5.42e-2 —
DDOST-congenital disorder of glycosylation Intellectual developmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
DDOST(2)
0.001 1.000 5.25e-2 5.42e-2 —
Intellectual developmental disorder Severe neonatal spondylometaphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
SBDS(2)
0.001 1.000 5.25e-2 5.42e-2 —
Intellectual developmental disorder severe intellectual disability-poor language-strabismus-grimacing face-long fingers syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GATAD2B(2)
0.001 1.000 5.25e-2 5.42e-2 —
Intellectual developmental disorder Sideroblastic anemia with b-cell immunodeficiency
1 gene
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1 of 1 corroborated by 2+ sources
TRNT1(5)
0.001 1.000 5.25e-2 5.42e-2 —
Intellectual developmental disorder schuurs-hoeijmakers syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PACS1(2)
0.001 1.000 5.25e-2 5.42e-2 —
Intellectual developmental disorder spinocerebellar ataxia type 42
1 gene
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1 of 1 corroborated by 2+ sources
CACNA1G(4)
0.001 1.000 5.25e-2 5.42e-2 —
Intellectual developmental disorder spinocerebellar ataxia type 5
1 gene
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1 of 1 corroborated by 2+ sources
SPTBN2(2)
0.001 1.000 5.25e-2 5.42e-2 —
Intellectual developmental disorder Robin sequence with cleft mandible and limb anomalies
1 gene
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1 of 1 corroborated by 2+ sources
EIF4A3(2)
0.001 1.000 5.25e-2 5.42e-2 —
Intellectual developmental disorder Rigidity and multifocal seizure syndrome, lethal neonatal
1 gene
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1 of 1 corroborated by 2+ sources
BRAT1(2)
0.001 1.000 5.25e-2 5.42e-2 —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.