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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Alpha-methylacyl-coa racemase deficiency Mitochondrial complex deficiency
1 gene
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1 of 1 corroborated by 2+ sources
AMACR(3)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Atherosclerosis congenital disorder of glycosylation, type iit
1 gene
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1 of 1 corroborated by 2+ sources
GALNT2(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Atherosclerosis Congenital malabsorptive diarrhea
1 gene
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1 of 1 corroborated by 2+ sources
NEUROG3(3)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Atherosclerosis Congenital malabsorptive diarrhea with diabetes mellitus and combined pituitary hormone deficiency
1 gene
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1 of 1 corroborated by 2+ sources
NEUROG3(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Mitochondrial complex deficiency neurodevelopmental disorder with microcephaly, impaired language, and gait abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
NARS1(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Mitochondrial complex deficiency neurodevelopmental disorder with microcephaly, impaired language, epilepsy, and gait abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
NARS1(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Isolated sensorineural deafness optic atrophy 13 with retinal and foveal abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
SSBP1(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Atherosclerosis Cerebrotendinous xanthomatosis
1 gene
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1 of 1 corroborated by 2+ sources
CYP27A1(6)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Atherosclerosis Cholestanol storage disease
1 gene
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1 of 1 corroborated by 2+ sources
CYP27A1(3)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
autosomal recessive nonsyndromic hearing loss 102 Isolated sensorineural deafness
1 gene
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1 of 1 corroborated by 2+ sources
EPS8(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. Cluster 26 →
autosomal recessive nonsyndromic hearing loss 63 Isolated sensorineural deafness
1 gene
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1 of 1 corroborated by 2+ sources
LRTOMT(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. Cluster 26 →
Isolated sensorineural deafness Sensorineural deafness with renal dysfunction
1 gene
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BSND(1)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Isolated sensorineural deafness Sensorineural hearing loss-spastic quadriplegia–intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
AFG2B(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Bjornstad syndrome Mitochondrial complex deficiency
1 gene
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1 of 1 corroborated by 2+ sources
BCS1L(8)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Atherosclerosis Gastroschisis
1 gene
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ADD1(1)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Atherosclerosis glycogen storage disease III
1 gene
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1 of 1 corroborated by 2+ sources
AGL(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Mitochondrial complex deficiency Mitochondrial encephalocardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TMEM70(5)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. Cluster 50 →
hearing loss, autosomal recessive 119 Isolated sensorineural deafness
1 gene
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1 of 1 corroborated by 2+ sources
AFG2B(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
hearing loss, autosomal recessive 120 Isolated sensorineural deafness
1 gene
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1 of 1 corroborated by 2+ sources
MINAR2(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. Cluster 26 →
high myopia-sensorineural deafness syndrome Isolated sensorineural deafness
1 gene
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1 of 1 corroborated by 2+ sources
SLITRK6(2)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Hurthle cell thyroid cancer Mitochondrial complex deficiency
1 gene
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1 of 1 corroborated by 2+ sources
NDUFA13(5)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Deafness and myopia Isolated sensorineural deafness
1 gene
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1 of 1 corroborated by 2+ sources
SLITRK6(3)
0.008 1.000 7.73e-3 9.02e-3 ✓ sig. —
Hypotrichosis Peeling skin syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CDSN(7)
0.042 0.143 7.70e-3 9.00e-3 ✓ sig. —
Male infertility round headed spermatozoa Substance-induced psychosis
1 gene
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1 of 1 corroborated by 2+ sources
PICK1(2)
0.042 0.143 7.70e-3 9.00e-3 ✓ sig. —
Graft versus host disease Larsen syndrome
1 gene
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1 of 1 corroborated by 2+ sources
XYLT1(2)
0.042 0.143 7.70e-3 9.00e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.