Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Corpus callosum agenesis with intellectual disability, coloboma, micrognathia Hepatocellular carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
IGBP1(8)
0.001 1.000 7.23e-2 7.34e-2 —
Desbuquois syndrome Short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARCN1(2)
0.002 1.000 3.65e-2 3.80e-2 ✓ sig. —
Desbuquois syndrome Short stature-micrognathia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARCN1(2)
0.002 1.000 3.65e-2 3.80e-2 ✓ sig. —
Breast neoplasms Corpus callosum agenesis with intellectual disability, coloboma, micrognathia
1 gene
Show details
1 of 1 corroborated by 2+ sources
IGBP1(8)
0.002 1.000 3.40e-2 3.56e-2 ✓ sig. —
Corpus callosum agenesis with intellectual disability, coloboma, micrognathia Lung neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
IGBP1(8)
0.004 1.000 1.61e-2 1.75e-2 ✓ sig. —
Corpus callosum agenesis with intellectual disability, coloboma, micrognathia Intellectual developmental disorder, x-linked
1 gene
Show details
1 of 1 corroborated by 2+ sources
IGBP1(8)
0.011 1.000 5.81e-3 6.84e-3 ✓ sig. Cluster 82 →
Ataxia Short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARCN1(2)
0.026 1.000 2.39e-3 3.12e-3 ✓ sig. —
Ataxia Short stature-micrognathia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARCN1(2)
0.026 1.000 2.39e-3 3.12e-3 ✓ sig. —
Microcephalic dwarfism Short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay
1 gene
Show details
ARCN1(1)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Microcephalic dwarfism Short stature-micrognathia syndrome
1 gene
Show details
ARCN1(1)
0.059 1.000 1.03e-3 1.57e-3 ✓ sig. —
Acrofacial dysostosis Micrognathia
1 gene
Show details
1 of 1 corroborated by 2+ sources
POLR1A(2)
0.167 0.500 5.16e-4 9.13e-4 ✓ sig. —
Burn-mckeown syndrome Micrognathia
1 gene
Show details
1 of 1 corroborated by 2+ sources
POLR1A(3)
0.250 0.500 2.58e-4 5.38e-4 ✓ sig. —
Cleidocranial dysplasia with micrognathia, absent thumbs, and distal aphalangia (yunis-varon syndrome) Micropenis
1 gene
Show details
1 of 1 corroborated by 2+ sources
FIG4(2)
0.200 1.000 2.58e-4 5.38e-4 ✓ sig. Cluster 166 →
Cystic hygroma Micrognathia
1 gene
Show details
NMNAT2(1)
0.333 1.000 1.29e-4 3.27e-4 ✓ sig. —
Mandibulofacial dysostosis, Cincinnati type Micrognathia
1 gene
Show details
POLR1A(1)
0.333 1.000 1.29e-4 3.27e-4 ✓ sig. —
Hypoplastic cerebellum Micrognathia
1 gene
Show details
NMNAT2(1)
0.333 1.000 1.29e-4 3.27e-4 ✓ sig. —
Cleidocranial dysplasia with micrognathia, absent thumbs, and distal aphalangia (yunis-varon syndrome) Yunis-varon syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FIG4(6)
0.333 1.000 1.29e-4 3.27e-4 ✓ sig. Cluster 166 →
Early progeroid syndrome Wormian bones-micrognathia-abnormal dentition-progeroid syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LEMD2(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 474 →
Amyotrophic lateral sclerosis type 11 Cleidocranial dysplasia with micrognathia, absent thumbs, and distal aphalangia (yunis-varon syndrome)
1 gene
Show details
1 of 1 corroborated by 2+ sources
FIG4(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 166 →
Microstomia Wormian bones-micrognathia-abnormal dentition-progeroid syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LEMD2(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 474 →
Short stature-micrognathia syndrome Short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay
1 gene
Show details
ARCN1(1)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. —
Congenital hypoplasia of clavicle Wormian bones-micrognathia-abnormal dentition-progeroid syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LEMD2(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 474 →
Cleidocranial dysplasia with micrognathia, absent thumbs, and distal aphalangia (yunis-varon syndrome) Polymicrogyria, bilateral temporooccipital
1 gene
Show details
FIG4(1)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 166 →
Cataract 46, juvenile-onset, with or without arrhythmic cardiomyopathy Wormian bones-micrognathia-abnormal dentition-progeroid syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LEMD2(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 474 →
Cataract 46, juvenile-onset Wormian bones-micrognathia-abnormal dentition-progeroid syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LEMD2(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. Cluster 474 →

Showing 25 of 26 matching pairs, sorted by significance (descending). Click a column header to sort.