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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
amyotrophic lateral sclerosis type 15 Neurotic disorder
1 gene
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1 of 1 corroborated by 2+ sources
UBQLN2(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
lesch-nyhan syndrome Neurotic disorder
1 gene
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1 of 1 corroborated by 2+ sources
HPRT1(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
meier-gorlin syndrome 2 Neurotic disorder
1 gene
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1 of 1 corroborated by 2+ sources
ORC4(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Autosomal recessive hypomyelinating leukodystrophy Melanoma
1 gene
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1 of 1 corroborated by 2+ sources
HIKESHI(4)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
autosomal recessive optic atrophy, OPA7 type Melanoma
1 gene
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1 of 1 corroborated by 2+ sources
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
ciliary dyskinesia, primary, 45 Neurotic disorder
1 gene
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1 of 1 corroborated by 2+ sources
TTC12(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Congenital cerebellar hypoplasia Neurotic disorder
1 gene
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1 of 1 corroborated by 2+ sources
OXR1(3)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Neurotic disorder Partial hypoxanthine-guanine phosphoribosyltransferase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HPRT1(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Neurotic disorder psychomotor regression-oculomotor apraxia-movement disorder-nephropathy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A9(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Melanoma Rufous oculocutaneous albinism
1 gene
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1 of 1 corroborated by 2+ sources
TYRP1(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Melanoma Short telomere syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ACD(3)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Melanoma Spastic ataxia optic atrophy dysarthria syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MTPAP(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Neurotic disorder syndromic multisystem autoimmune disease due to ITCH deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ITCH(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Congenital primary lymphedema of gordon Melanoma
1 gene
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1 of 1 corroborated by 2+ sources
VEGFC(3)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Cystathioninuria Melanoma
1 gene
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1 of 1 corroborated by 2+ sources
CTH(7)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Birk-landau-perez syndrome Neurotic disorder
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A9(3)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Blepharophimosis intellectual disability syndrome Neurotic disorder
1 gene
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1 of 1 corroborated by 2+ sources
UBE3B(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Hoxha-aliu syndrome Neurotic disorder
1 gene
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1 of 1 corroborated by 2+ sources
ERI1(4)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
hypomyelinating leukodystrophy 13 Melanoma
1 gene
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1 of 1 corroborated by 2+ sources
HIKESHI(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Neurotic disorder Neutrophilic leukemia
1 gene
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1 of 1 corroborated by 2+ sources
CSF3R(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Neurotic disorder Oculocerebrofacial syndrome
1 gene
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1 of 1 corroborated by 2+ sources
UBE3B(4)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Desmosterolosis Melanoma
1 gene
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1 of 1 corroborated by 2+ sources
DHCR24(8)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
dilated cardiomyopathy 1V Melanoma
1 gene
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1 of 1 corroborated by 2+ sources
PSEN2(2)
0.002 1.000 2.83e-2 3.00e-2 ✓ sig. —
Amelocerebrohypohidrotic syndrome Developmental and epileptic encephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
SLC13A5(7)
0.005 0.500 2.84e-2 3.02e-2 ✓ sig. —
Central hypoventilation syndrome Neuroblastoma
1 gene
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1 of 1 corroborated by 2+ sources
PHOX2B(7)
0.006 0.333 2.91e-2 3.10e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.