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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Amyotrophic lateral sclerosis Vertical talus
1 gene
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1 of 1 corroborated by 2+ sources
HOXD10(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Xerosis with immune and pulmonary dysfunction syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DBR1(5)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Xgip syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DBR1(2)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis T-B+ severe combined immunodeficiency due to JAK3 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
JAK3(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Telangiectasia–intellectual disability–microcephaly–metaphyseal dysplasia–eye abnormalities–short stature syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LRRC8C(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. Cluster 15 →
Amyotrophic lateral sclerosis neuropathy, hereditary sensory and autonomic, type 1A
1 gene
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1 of 1 corroborated by 2+ sources
SPTLC1(6)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis neuropathy, hereditary sensory and autonomic, type 1C
1 gene
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1 of 1 corroborated by 2+ sources
SPTLC2(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis obsolete hyperinsulinism due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HADH(2)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Arthrogryposis with anterior horn cell disease
1 gene
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1 of 1 corroborated by 2+ sources
GLE1(4)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Bilateral congenital vertical talus
1 gene
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1 of 1 corroborated by 2+ sources
HOXD10(2)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis Congenital arthrogryposis with anterior horn cell disease
1 gene
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1 of 1 corroborated by 2+ sources
GLE1(5)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis frontotemporal dementia and/or amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
GRN(2)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis frontotemporal dementia and/or amyotrophic lateral sclerosis 2
1 gene
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1 of 1 corroborated by 2+ sources
CHCHD10(4)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis frontotemporal dementia and/or amyotrophic lateral sclerosis 7
1 gene
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1 of 1 corroborated by 2+ sources
CHMP2B(6)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
12q15q21 microdeletion syndrome Amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
CNOT2(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
3-hydroxyacyl-coa dehydrogenase deficiency Amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
HADH(3)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Adult-onset proximal spinal muscular atrophy Amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
VAPB(7)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
ALS2-related motor neuron disease Amyotrophic lateral sclerosis
1 gene
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1 of 1 corroborated by 2+ sources
ALS2(8)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis 26 with or without frontotemporal dementia
1 gene
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1 of 1 corroborated by 2+ sources
TIA1(5)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 15
1 gene
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1 of 1 corroborated by 2+ sources
UBQLN2(7)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 18
1 gene
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1 of 1 corroborated by 2+ sources
PFN1(7)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 23
1 gene
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1 of 1 corroborated by 2+ sources
ANXA11(6)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 8
1 gene
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1 of 1 corroborated by 2+ sources
VAPB(7)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis amyotrophic lateral sclerosis type 9
1 gene
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1 of 1 corroborated by 2+ sources
ANG(8)
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —
Amyotrophic lateral sclerosis inclusion body myopathy with early-onset paget disease with or without frontotemporal dementia 2
1 gene
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1 of 1 corroborated by 2+ sources
0.003 1.000 2.16e-2 2.34e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.