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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Atrial tachyarrhythmia, infra-hisian cardiac conduction disease Dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TNNI3K(3)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Barth syndrome Dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Dilated cardiomyopathy dilated cardiomyopathy 1M
1 gene
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1 of 1 corroborated by 2+ sources
CSRP3(8)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. Cluster 369 →
Dilated cardiomyopathy dilated cardiomyopathy 1V
1 gene
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1 of 1 corroborated by 2+ sources
PSEN2(7)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Dilated cardiomyopathy dilated cardiomyopathy 1Z
1 gene
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1 of 1 corroborated by 2+ sources
TNNC1(8)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Dilated cardiomyopathy dilated cardiomyopathy 2B
1 gene
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1 of 1 corroborated by 2+ sources
GATAD1(7)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Dilated cardiomyopathy DK1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DOLK(4)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
combined immunodeficiency due to OX40 deficiency Dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TNFRSF4(3)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Dilated cardiomyopathy Rhizomelic dysplasia, ain-naz type
1 gene
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1 of 1 corroborated by 2+ sources
GNPNAT1(4)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Dilated cardiomyopathy Spastic ataxia with leukoencephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
MARS2(2)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Dilated cardiomyopathy spermatogenic failure 39
1 gene
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1 of 1 corroborated by 2+ sources
DNAH17(2)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
cardiomyopathy, dilated, 2d Dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
RPL3L(6)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
cardiomyopathy, dilated, 2g Dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
LMOD2(6)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
cardiomyopathy, dilated, 2h Dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
GET3(6)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. Cluster 369 →
cardiomyopathy, dilated, 2j Dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
FLII(6)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
cardiomyopathy, dilated, 2k Dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYZAP(5)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Dilated cardiomyopathy lymphoproliferative syndrome 2
1 gene
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1 of 1 corroborated by 2+ sources
CD27(3)
0.004 1.000 1.77e-2 1.94e-2 ✓ sig. —
Autoinflammatory syndrome with pyogenic bacterial infection and amylopectinosis Immunodeficiency
1 gene
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1 of 1 corroborated by 2+ sources
RNF31(6)
0.007 0.500 1.80e-2 1.97e-2 ✓ sig. —
Degenerative polyarthritis Immunodeficiency
1 gene
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1 of 1 corroborated by 2+ sources
TLR8(4)
0.007 0.500 1.80e-2 1.97e-2 ✓ sig. —
Birt-hogg-dube syndrome Renal cell carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
FLCN(7)
0.007 0.500 1.80e-2 1.97e-2 ✓ sig. —
Carnitine acetyltransferase deficiency Pelvic organ prolapse
1 gene
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1 of 1 corroborated by 2+ sources
CRAT(2)
0.007 0.500 1.80e-2 1.97e-2 ✓ sig. —
Cirrhosis Digestive system disease
1 gene
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1 of 1 corroborated by 2+ sources
UTP4(2)
0.010 0.333 1.80e-2 1.97e-2 ✓ sig. —
Congenital heart defects Visceral heterotaxy
1 gene
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1 of 1 corroborated by 2+ sources
LEFTY2(2)
0.014 0.250 1.81e-2 1.98e-2 ✓ sig. —
Gastroesophageal reflux disease Thauvin-robinet-faivre syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FIBP(3)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —
Borderline personality disorder Depression
1 gene
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TPH1(1)
0.004 1.000 1.81e-2 1.98e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.