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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Nephrotic syndrome nephrotic syndrome, type 18
1 gene
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1 of 1 corroborated by 2+ sources
NUP133(5)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome nephrotic syndrome, type 19
1 gene
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1 of 1 corroborated by 2+ sources
NUP160(5)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome nephrotic syndrome, type 20
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D8B(5)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome nephrotic syndrome, type 21
1 gene
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1 of 1 corroborated by 2+ sources
AVIL(5)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Nephrotic syndrome nephrotic syndrome, type 8
1 gene
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1 of 1 corroborated by 2+ sources
ARHGDIA(6)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome Ocular cystinosis
1 gene
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1 of 1 corroborated by 2+ sources
CTNS(4)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Nephrotic syndrome Thiamine-responsive encephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
SLC19A3(3)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Nephrotic syndrome Woolly hair-palmoplantar keratoderma syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KANK2(4)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Nephrotic syndrome X-linked nephrolithiasis
1 gene
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1 of 1 corroborated by 2+ sources
CLCN5(2)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
COG1-congenital disorder of glycosylation Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
COG1(2)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
ehlers-danlos syndrome, musculocontractural type 2 Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DSE(2)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
membranoproliferative glomerulonephritis Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DGKE(4)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Mineralocortocoid excess Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
HSD11B2(7)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. Cluster 30 →
Biotin-thiamine-responsive basal ganglia disease Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC19A3(4)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
atypical hemolytic-uremic syndrome with DGKE deficiency Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DGKE(4)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Aica-ribosiduria Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ATIC(2)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Alanine-glyoxylate aminotransferase deficiency Nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AGXT(3)
0.006 1.000 1.08e-2 1.22e-2 ✓ sig. —
Bone neoplasms Machado-joseph disease
1 gene
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THSD7B(1)
0.034 0.125 1.09e-2 1.22e-2 ✓ sig. —
complex hereditary spastic paraplegia Polyneuropathy
1 gene
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1 of 1 corroborated by 2+ sources
GBA2(2)
0.032 0.143 1.09e-2 1.22e-2 ✓ sig. —
Autoinflammatory syndrome with pyogenic bacterial infection and amylopectinosis Cardiomegaly
1 gene
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1 of 1 corroborated by 2+ sources
RBCK1(3)
0.012 0.500 1.09e-2 1.23e-2 ✓ sig. —
Non-melanoma skin carcinoma Thrombocytopenia with anemia and myelofibrosis
1 gene
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1 of 1 corroborated by 2+ sources
MPIG6B(6)
0.006 1.000 1.10e-2 1.24e-2 ✓ sig. —
hyper-IgE recurrent infection syndrome 3, autosomal recessive Non-melanoma skin carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
ZNF341(2)
0.006 1.000 1.10e-2 1.24e-2 ✓ sig. Cluster 29 →
Combined malonic and methylmalonic acidemia Non-melanoma skin carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
ACSF3(4)
0.006 1.000 1.10e-2 1.24e-2 ✓ sig. —
Combined malonic and methylmalonic aciduria Non-melanoma skin carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
ACSF3(4)
0.006 1.000 1.10e-2 1.24e-2 ✓ sig. —
Congenital corneal opacity Non-melanoma skin carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
ZFHX4(2)
0.006 1.000 1.10e-2 1.24e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.