Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Glycoprotein vi deficiency Platelet disorder
1 gene
Show details
GP6(1)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Retinopathy-sensory neuropathy syndrome Sensory neuropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLVCR1(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Lethal congenital contracture syndrome Rigidity and multifocal seizure syndrome, lethal neonatal
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRAT1(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Progressive external ophthalmoplegia Rod-cone dystrophy, sensorineural deafness, and fanconi-type renal dysfunction
1 gene
Show details
1 of 1 corroborated by 2+ sources
RRM2B(5)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Oculocutaneous albinism Rufous oculocutaneous albinism
1 gene
Show details
1 of 1 corroborated by 2+ sources
TYRP1(4)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. Cluster 298 →
schimke immuno-osseous dysplasia Steroid-resistant nephrotic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Hyperbilirubinemia severe combined immunodeficiency due to IKK2 deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
IKBKB(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Spinocerebellar ataxia blindness deafness syndrome Zellweger spectrum disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
PEX6(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
spondyloepiphyseal dysplasia with congenital joint dislocations Vertebral column disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHST3(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Basal ganglia disease Striatal neurodegeneration
1 gene
Show details
1 of 1 corroborated by 2+ sources
PDE8B(5)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. Cluster 390 →
Hyperbilirubinemia immunodeficiency 15a
1 gene
Show details
1 of 1 corroborated by 2+ sources
IKBKB(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Intellectual developmental disorder dysmorphic brain Malunion fracture
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRAPPC9(4)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Byzanthine arch palate Intellectual developmental disorder microcephaly strabismus behaviora
1 gene
Show details
1 of 1 corroborated by 2+ sources
POGZ(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Intellectual developmental disorder with retinitis pigmentosa Intracranial hemorrhage
1 gene
Show details
1 of 1 corroborated by 2+ sources
SCAPER(5)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Intestinal aganglionosis Waardenburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDNRB(7)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
lamb-shaffer syndrome Vertebral column disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOX5(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Costello syndrome legius syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPRED1(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Developmental delay with autism spectrum disorder Macular and posterior pole degeneration
1 gene
Show details
1 of 1 corroborated by 2+ sources
HERC2(4)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Costello syndrome dilated cardiomyopathy 1D
1 gene
Show details
1 of 1 corroborated by 2+ sources
TNNT2(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
dilated cardiomyopathy 1I Hyperhomocysteinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
DES(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Dubin-johnson syndrome Hyperbilirubinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCC2(6)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Early-onset hypertension with severe exacerbation in pregnancy Pseudohypoparathyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR3C2(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
ectodermal dysplasia and immunodeficiency 2 Giant cell glioblastoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
NFKBIA(2)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
EGLN1-related erythrocytosis and pheochromocytoma/paraganglioma predisposition Erythrocytosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
EGLN1(6)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Eiken skeletal dysplasia Pseudohypoparathyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTH1R(6)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.