Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Acro-dermo-ungual-lacrimal-tooth syndrome Skin abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
TP63(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Delirium SLC6A3-related dopamine transporter deficiency syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC6A3(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Septo-optic dysplasia SOX3-related X-linked pituitary hormone deficiency with or without intellectual developmental disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOX3(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Epiphyseal dysplasia Stickler syndrome, type 4
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL9A1(6)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 248 →
Brachycephaly Sweeney-cox syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TWIST1(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 127 →
Omenn syndrome T-B+ severe combined immunodeficiency due to gamma chain deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
IL2RG(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Goldenhar syndrome T-cell immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
FOXI3(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 48 →
Dwarfism Tatton-Brown-Rahman overgrowth syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DNMT3A(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Brachycephaly TCF12-related craniosynostosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TCF12(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 127 →
Swyer syndrome Testicular regression syndrome
1 gene
Show details
DHX37(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 38 →
Iron deficiency anemia TFRC-related combined immunodeficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TFRC(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 227 →
Myelomonocytic leukemia thrombocytopenia 5
1 gene
Show details
1 of 1 corroborated by 2+ sources
ETV6(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Cataract-corneal dystrophy syndrome Tooth abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
PAX6(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 74 →
PAX6-related ocular dysgenesis Tooth abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
PAX6(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 74 →
Ring dermoid of cornea Tooth abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
PITX2(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Carbohydrate metabolism disease Transaldolase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TALDO1(6)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 354 →
Hypertensive heart disease Trichomegaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGF5(5)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Chromosome 8p23.1 monosomy Tricuspid valve disease
1 gene
Show details
GATA4(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Congenital pulmonary valve atresia Tricuspid valve disease
1 gene
Show details
GATA4(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Martsolf syndrome TUBB3-related tubulinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBB3(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Brachycephaly Turricephaly
1 gene
Show details
ZIC1(1)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Brachycephaly TWIST1-related craniosynostosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TWIST1(2)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 127 →
Delirium Tyrosine hydroxylase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TH(3)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —
Tooth abnormalities Ulnar-mammary syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX3(6)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. Cluster 74 →
Headache Vitamin e deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TTPA(4)
0.091 1.000 6.49e-4 1.24e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.