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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Familial ventricular tachycardia Retractile testis
1 gene
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1 of 1 corroborated by 2+ sources
GNAI2(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
FAT4-related neurodevelopmental disorder Van maldergem syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FAT4(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Feingold syndrome Progressive contractures limb-girdle weakness muscle dystrophy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TTN(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
Early-onset myopathy with fatal cardiomyopathy Feingold syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TTN(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
Feingold syndrome myopathy, myofibrillar, 9, with early respiratory failure
1 gene
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1 of 1 corroborated by 2+ sources
TTN(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
Feingold syndrome tibial muscular dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
TTN(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
dilated cardiomyopathy 1G Feingold syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TTN(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 221 →
Atelosteogenesis FLNB-associated autosomal dominant filamin related bone disorder
1 gene
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1 of 1 corroborated by 2+ sources
FLNB(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
FLVCR1-related retinopathy with or without ataxia Posterior column ataxia with retinitis pigmentosa
1 gene
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1 of 1 corroborated by 2+ sources
FLVCR1(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Focal epilepsy-intellectual disability-cerebro-cerebellar malformation Infantile myoclonic epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D24(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 90 →
Focal epilepsy-intellectual disability-cerebro-cerebellar malformation Periodic paralysis
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D24(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 90 →
focal segmental glomerulosclerosis 7 Renal hypoplasia
1 gene
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1 of 1 corroborated by 2+ sources
PAX2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Fowler syndrome Posterior column ataxia with retinitis pigmentosa
1 gene
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1 of 1 corroborated by 2+ sources
FLVCR2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
FOXC1-related anterior segment dysgenesis Iridogoniodysgenesis
1 gene
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1 of 1 corroborated by 2+ sources
FOXC1(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 253 →
fragile x syndrome Xq27.3 q28 duplication syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FMR1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
free sialic acid storage disease Salla disease
1 gene
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1 of 1 corroborated by 2+ sources
SLC17A5(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 173 →
Congenital idiopathic intestinal pseudoobstruction Frontometaphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
FLNA(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 62 →
Frontometaphyseal dysplasia Otopalatodigital spectrum disorder
1 gene
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1 of 1 corroborated by 2+ sources
FLNA(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 62 →
Frontometaphyseal dysplasia Terminal osseous dysplasia with pigmentary defects
1 gene
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1 of 1 corroborated by 2+ sources
FLNA(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 62 →
Frontometaphyseal dysplasia X-linked ehlers-danlos syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FLNA(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 62 →
Frontometaphyseal dysplasia X-linked keloid scarring syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FLNA(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 62 →
Frontonasal dysplasia with alopecia and genital anomaly Parietal foramina
1 gene
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1 of 1 corroborated by 2+ sources
ALX4(8)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 93 →
frontotemporal dementia and/or amyotrophic lateral sclerosis 3 Welander distal myopathy
1 gene
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1 of 1 corroborated by 2+ sources
SQSTM1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Fructokinase deficiency Fructosuria
1 gene
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1 of 1 corroborated by 2+ sources
KHK(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Feingold syndrome Gallbladder agenesis
1 gene
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1 of 1 corroborated by 2+ sources
MYCN(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.