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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Hemoglobin d disease Hemoglobin sc disease
1 gene
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1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Cooleys anemia Hemoglobin sd disease
1 gene
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HBB(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Dominant beta-thalassemia Hemoglobin sd disease
1 gene
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1 of 1 corroborated by 2+ sources
HBB(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin c disease Hemoglobin sd disease
1 gene
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1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin c beta thalassemia Hemoglobin sd disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin d disease Hemoglobin sd disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Cooleys anemia Hemoglobin se disease
1 gene
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HBB(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Dominant beta-thalassemia Hemoglobin se disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin c disease Hemoglobin se disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin c beta thalassemia Hemoglobin se disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin d disease Hemoglobin se disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Cooleys anemia Hemoglobinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Dominant beta-thalassemia Hemoglobinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin c disease Hemoglobinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin c beta thalassemia Hemoglobinopathy
1 gene
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1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemoglobin d disease Hemoglobinopathy
1 gene
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1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
Hemophilia b carriers thrombophilia, X-linked, due to factor 9 defect
1 gene
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1 of 1 corroborated by 2+ sources
F9(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
hereditary hyperferritinemia with congenital cataracts neuroferritinopathy
1 gene
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FTL(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
hermansky-pudlak syndrome 10 Ocular albinism with sensorineural deafness
1 gene
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1 of 1 corroborated by 2+ sources
AP3D1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 414 →
heyn-sproul-jackson syndrome Microcephalic dwarfism
1 gene
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1 of 1 corroborated by 2+ sources
DNMT3A(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 268 →
heyn-sproul-jackson syndrome Tatton-Brown-Rahman overgrowth syndrome
1 gene
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DNMT3A(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 268 →
Hmg-coa lyase deficiency Hydroxymethylglutaryl-coa lyase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HMGCL(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
holoprosencephaly 3 Preaxial polydactyly with upper back hypertrichosis
1 gene
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1 of 1 corroborated by 2+ sources
SHH(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 232 →
holoprosencephaly 3 Skeletal system disorder
1 gene
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1 of 1 corroborated by 2+ sources
SHH(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 232 →
homocystinuria due to methylene tetrahydrofolate reductase deficiency Microvascular angina
1 gene
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1 of 1 corroborated by 2+ sources
MTHFR(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 204 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.