Pathways column key: KEGG Reactome

Disease Term	Disease ID	Gene Symbol	Classification	References	Source	Pathways
INFLAMMATORY BOWEL DISEASE	EFO_0003767	NUPR1	Unknown	28067908 35512355 37156999 37523193 38102678 39792054	GWAS catalog	Transcriptional misregulation in cancer
		NXPE1	Unknown	26192919 28067908 37156999	GWAS catalog	—
		OSMR	Unknown	26192919 28067908 37156999	GWAS catalog	Cytokine-cytokine receptor interaction PI3K-Akt signaling pathway JAK-STAT signaling pathway +1 more
		OTUD3	Unknown	26192919 28067908 33608531 37156999 37377963 37965154 39792054	GWAS catalog	Ovarian tumor domain proteases Regulation of PTEN stability and activity
		P4HA2	Unknown	33608531 37965154 38102678 39792054	GWAS catalog	Arginine and proline metabolism Metabolic pathways Collagen biosynthesis and modifying enzymes
		PARK7	Unknown	23128233 26192919 28067908 37523193	GWAS catalog	Parkinson disease Pathways of neurodegeneration - multiple diseases SUMOylation of transcription cofactors +1 more
		PARVA	Unknown	38102678	GWAS catalog	Focal adhesion Localization of the PINCH-ILK-PARVIN complex to focal adhesions Cell-extracellular matrix interactions +1 more
		PCSK5	Unknown	27569725	GWAS catalog	NGF processing Assembly of active LPL and LIPC lipase complexes
		PDE4A	Unknown	39792054	GWAS catalog	Purine metabolism Metabolic pathways cAMP signaling pathway +4 more
		PDGFB	Unknown	21102463 23128233 26192919 28067908 37156999 39792054	GWAS catalog	EGFR tyrosine kinase inhibitor resistance MAPK signaling pathway Ras signaling pathway +25 more
		PDK1	Unknown	37156999	GWAS catalog	HIF-1 signaling pathway Central carbon metabolism in cancer Regulation of pyruvate dehydrogenase (PDH) complex +1 more
		PDLIM4	Unknown	33608531 37965154 38102678	GWAS catalog	Cytoskeleton in muscle cells
		PEAK1	Unknown	38102678	GWAS catalog	—
		PER3	Unknown	21102463	GWAS catalog	Circadian rhythm Circadian entrainment
		PGAP3	Unknown	37262302 38102678	GWAS catalog	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis Metabolic pathways
		PHACTR2	Unknown	23128233 26192919 37156999	GWAS catalog	Platelet degranulation
		PHC2	Unknown	37156999	GWAS catalog	Polycomb repressive complex Oxidative Stress Induced Senescence SUMOylation of DNA damage response and repair proteins +5 more
		PHTF1	Unknown	23128233 37377963	GWAS catalog	—
		PIK3C2B	Unknown	38102678	GWAS catalog	Inositol phosphate metabolism Metabolic pathways Phosphatidylinositol signaling system +2 more
		PIK3R1	Unknown	32581322	GWAS catalog	EGFR tyrosine kinase inhibitor resistance Endocrine resistance Platinum drug resistance +150 more
		PKD1	Unknown	37156999	GWAS catalog	VxPx cargo-targeting to cilium
		PLA2G2D	Unknown	32581322	GWAS catalog	Glycerophospholipid metabolism Ether lipid metabolism Arachidonic acid metabolism +13 more
		PLA2G4A	Unknown	26192919 37156999	GWAS catalog	Glycerophospholipid metabolism Ether lipid metabolism Arachidonic acid metabolism +33 more
		PLA2G5	Unknown	32581322	GWAS catalog	Glycerophospholipid metabolism Ether lipid metabolism Arachidonic acid metabolism +13 more
		PLA2R1	Unknown	26192919	GWAS catalog	Phagosome Tuberculosis Acyl chain remodelling of PC +5 more
		PLAU	Unknown	23128233 26192919 28067908	GWAS catalog	NF-kappa B signaling pathway Complement and coagulation cascades Transcriptional misregulation in cancer +5 more
		PLB1	Unknown	37156999	GWAS catalog	Glycerophospholipid metabolism Ether lipid metabolism Arachidonic acid metabolism +6 more
		PLCG2	Unknown	28067908 37156999	GWAS catalog	Inositol phosphate metabolism Metabolic pathways EGFR tyrosine kinase inhibitor resistance +49 more
		PLCL1	Unknown	21102463 26192919 28067908 37156999 38102678	GWAS catalog	GABAergic synapse
		PLEKHH2	Unknown	39792054	GWAS catalog	—
		PLPP3	Unknown	37156999	GWAS catalog	Glycerolipid metabolism Glycerophospholipid metabolism Ether lipid metabolism +7 more
		PLXNA2	Unknown	27569725	GWAS catalog	Axon guidance Sema3A PAK dependent Axon repulsion SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion +1 more
		PMPCA	Unknown	39792054	GWAS catalog	Processing of SMDT1
		PNKD	Unknown	23128233 26192919 28067908 37262302	GWAS catalog	—
		POFUT1	Unknown	26192919	GWAS catalog	Other types of O-glycan biosynthesis
		POM121L2	Unknown	38102678	GWAS catalog	Nucleocytoplasmic transport Amyotrophic lateral sclerosis
		POP7	Unknown	23128233 36753304 37156999	GWAS catalog	Ribosome biogenesis in eukaryotes tRNA processing in the nucleus
		POU5F1	Unknown	23266558 37262302 37377963	GWAS catalog	Signaling pathways regulating pluripotency of stem cells POU5F1 (OCT4), SOX2, NANOG repress genes related to differentiation POU5F1 (OCT4), SOX2, NANOG activate genes related to proliferation +1 more
		PPBP	Unknown	23128233	GWAS catalog	Cytokine-cytokine receptor interaction Viral protein interaction with cytokine and cytokine receptor Chemokine signaling pathway +4 more
		PPM1G	Unknown	23128233	GWAS catalog	—
		PPP5C	Unknown	23128233 26192919 28067908 37156999	GWAS catalog	MAPK signaling pathway Negative regulation of MAPK pathway Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks +1 more
		PRDM1	Unknown	18587394 21102463 23128233 26192919 28067908 37156999 37262302 39792054	GWAS catalog	Regulation of TP53 Expression
		PRDX5	Unknown	21102463 37156999	GWAS catalog	Peroxisome Detoxification of Reactive Oxygen Species TP53 Regulates Metabolic Genes
		PRKCB	Unknown	23128233 26192919 28067908 36753304 37156999	GWAS catalog	EGFR tyrosine kinase inhibitor resistance MAPK signaling pathway ErbB signaling pathway +77 more
		PRORP	Unknown	37262302	GWAS catalog	tRNA processing in the mitochondrion tRNA modification in the mitochondrion rRNA processing in the mitochondrion
		PRR5L	Unknown	37156999	GWAS catalog	mTOR signaling pathway
		PRRC2A	Unknown	37262302 37377963	GWAS catalog	—
		PRXL2B	Unknown	26192919 28067908	GWAS catalog	Arachidonic acid metabolism Metabolic pathways
		PSEN2	Unknown	37156999	GWAS catalog	Notch signaling pathway Neurotrophin signaling pathway Alzheimer disease +9 more
		PSMA6	Unknown	37262302	GWAS catalog	Proteasome Alzheimer disease Parkinson disease +56 more
INFLAMMATORY BOWEL DISEASES	C0021390 MESH:D015212	PLCG2	Unknown	28067908	CTD, Disgenet	Inositol phosphate metabolism Metabolic pathways EGFR tyrosine kinase inhibitor resistance +49 more

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Inflammatory bowel disease

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