Pathways column key: KEGG Reactome

Disease Term	Disease ID	Gene Symbol	Classification	References	Source	Pathways
BREAST CANCER	MONDO_0007254 MONDO:0007254 114480	PPRC1	Unknown	29059683	GWAS catalog	Transcriptional activation of mitochondrial biogenesis
		PRC1	Unknown	25038754 29059683 32139696 36819030	GWAS catalog	RHO GTPases activate CIT
		PRDM15	Unknown	38538606	GWAS catalog	—
		PRDM6	Unknown	29059683 37340002	GWAS catalog	Lysine degradation Metabolic pathways
		PRDX1	Unknown	29059683	GWAS catalog	Peroxisome Cobalamin transport and metabolism Amoebiasis +2 more
		PRIM1	Unknown	37380357	GWAS catalog	DNA replication Inhibition of replication initiation of damaged DNA by RB1/E2F1 Polymerase switching on the C-strand of the telomere +6 more
		PRKG1	Unknown	29059683 37340002	GWAS catalog	cGMP-PKG signaling pathway Hormone signaling Vascular smooth muscle contraction +10 more
		PRLR	Unknown	38538606	GWAS catalog	Cytokine-cytokine receptor interaction Neuroactive ligand-receptor interaction Hormone signaling +5 more
		PRORP	Unknown	29059683	GWAS catalog	tRNA processing in the mitochondrion tRNA modification in the mitochondrion rRNA processing in the mitochondrion
		PSD3	Unknown	37851288	GWAS catalog	Endocytosis
		PTCH1	Unknown	29059683	GWAS catalog	cAMP signaling pathway Hedgehog signaling pathway Axon guidance +7 more
		PTDSS2	Unknown	29059683	GWAS catalog	Glycerophospholipid metabolism Metabolic pathways Synthesis of PS
		PTHLH	Unknown	23535729 23535733 25751625 27117709 29059683 31757997 32139696 32514122 32887889 34290314 34594039 37340002 37636041 38538606	GWAS catalog	Hormone signaling Parathyroid hormone synthesis, secretion and action Class B/2 (Secretin family receptors) +2 more
		PTPN9	Unknown	29059683	GWAS catalog	Interleukin-37 signaling
		PTPRD	Unknown	29059683	GWAS catalog	Cell adhesion molecules Receptor-type tyrosine-protein phosphatases Synaptic adhesion-like molecules
		PTPRT	Unknown	38538606	GWAS catalog	—
		PXDNL	Unknown	29059683	GWAS catalog	—
		RAB3C	Unknown	23535729 25751625 29059683 32139696	GWAS catalog	RAB geranylgeranylation
		RAD51B	Unknown	19330030 23535729 25751625 29059683 32139696 32887889 34290314 34594039 37340002 38538606	GWAS catalog	Homologous recombination HDR through Homologous Recombination (HRR) Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA) +4 more
		RALB	Unknown	27117709	GWAS catalog	Ras signaling pathway Rap1 signaling pathway Phospholipase D signaling pathway +3 more
		RALY	Unknown	22976474	GWAS catalog	—
		RANBP9	Unknown	23535729 25751625 29059683 32139696 36819030 37380357	GWAS catalog	L1CAM interactions RAF/MAP kinase cascade MET activates RAS signaling
		RASA2	Unknown	29059683	GWAS catalog	MAPK signaling pathway Ras signaling pathway Viral carcinogenesis +1 more
		RASAL1	Unknown	—	GenCC	Ras signaling pathway Regulation of RAS by GAPs
		RB1CC1	Unknown	—	HPO	Autophagy - animal Longevity regulating pathway Alzheimer disease +5 more
		RBBP8	Unknown	29059683 32424353	GWAS catalog	Homologous recombination HDR through Single Strand Annealing (SSA) HDR through MMEJ (alt-NHEJ) +9 more
		RBFOX1	Unknown	40229280	GWAS catalog	—
		RBM20	Unknown	37340002	GWAS catalog	—
		RBMS1	Unknown	29059683	GWAS catalog	—
		RCCD1	Unknown	29059683	GWAS catalog	—
		RCE1	Unknown	29059683	GWAS catalog	Terpenoid backbone biosynthesis Ub-specific processing proteases
		RECQL5	Unknown	—	GenCC	—
		RELL1	Unknown	40229280	GWAS catalog	Cytokine-cytokine receptor interaction
		RESF1	Unknown	38538606	GWAS catalog	—
		RFC1	Unknown	38501904	GWAS catalog	DNA replication Base excision repair Nucleotide excision repair +15 more
		RGS10	Unknown	29059683	GWAS catalog	G alpha (i) signalling events
		RIGI	Unknown	29059683 37340002	GWAS catalog	—
		RIN2	Unknown	29059683	GWAS catalog	RAB GEFs exchange GTP for GDP on RABs
		RIN3	Unknown	25751625 29059683 32139696 36819030	GWAS catalog	RAB GEFs exchange GTP for GDP on RABs
		RIPK4	Unknown	38538606	GWAS catalog	—
		RNF115	Unknown	25751625 29059683 32139696	GWAS catalog	Antigen processing: Ubiquitination & Proteasome degradation
		RNF146	Unknown	18326623	GWAS catalog	TCF dependent signaling in response to WNT Degradation of AXIN Ub-specific processing proteases +1 more
		RNF19A	Unknown	29059683	GWAS catalog	Antigen processing: Ubiquitination & Proteasome degradation
		RNGTT	Unknown	38538606	GWAS catalog	mRNA surveillance pathway mRNA Capping RNA Pol II CTD phosphorylation and interaction with CE
		ROPN1L	Unknown	21424380	GWAS catalog	—
		ROS1	Unknown	—	GenCC	—
		RPLP2	Unknown	29059683 32139696	GWAS catalog	Ribosome Coronavirus disease - COVID-19 L13a-mediated translational silencing of Ceruloplasmin expression +7 more
		RREB1	Unknown	29059683 37340002	GWAS catalog	—
		RSL24D1	Unknown	40229280	GWAS catalog	Ribosome Coronavirus disease - COVID-19
		RSRC1	Unknown	38501904	GWAS catalog	—
BREAST CARCINOMA	EFO_0000305	PPRC1	Unknown	29059683	GWAS catalog	Transcriptional activation of mitochondrial biogenesis
		PRC1	Unknown	25038754 29059683 32139696	GWAS catalog	RHO GTPases activate CIT
		PRDM15	Unknown	38538606	GWAS catalog	—
		PRDM6	Unknown	25342443 29059683 33037222 35414113 37340002	GWAS catalog	Lysine degradation Metabolic pathways
		PRDX1	Unknown	29059683	GWAS catalog	Peroxisome Cobalamin transport and metabolism Amoebiasis +2 more
		PRKG1	Unknown	29059683 33037222 37340002	GWAS catalog	cGMP-PKG signaling pathway Hormone signaling Vascular smooth muscle contraction +10 more
		PRLR	Unknown	38538606	GWAS catalog	Cytokine-cytokine receptor interaction Neuroactive ligand-receptor interaction Hormone signaling +5 more
		PRORP	Unknown	29059683	GWAS catalog	tRNA processing in the mitochondrion tRNA modification in the mitochondrion rRNA processing in the mitochondrion
		PSD3	Unknown	37851288	GWAS catalog	Endocytosis
		PTCH1	Unknown	29059683	GWAS catalog	cAMP signaling pathway Hedgehog signaling pathway Axon guidance +7 more
		PTDSS2	Unknown	29059683	GWAS catalog	Glycerophospholipid metabolism Metabolic pathways Synthesis of PS
		PTHLH	Unknown	23535729 23535733 23544013 25751625 27117709 29058716 29059683 31757997 32139696 32514122 32887889 34290314 34594039 37340002 38538606	GWAS catalog	Hormone signaling Parathyroid hormone synthesis, secretion and action Class B/2 (Secretin family receptors) +2 more
		PTPN9	Unknown	29059683	GWAS catalog	Interleukin-37 signaling
		PTPRD	Unknown	29059683 35418701	GWAS catalog	Cell adhesion molecules Receptor-type tyrosine-protein phosphatases Synaptic adhesion-like molecules
		PTPRT	Unknown	38538606	GWAS catalog	—
		PXDNL	Unknown	29059683	GWAS catalog	—
		RAB3C	Unknown	23535729 25751625 29059683 32139696	GWAS catalog	RAB geranylgeranylation
		RAD51B	Unknown	19330030 22232737 23535729 25751625 27197191 29058716 29059683 32139696 32887889 33037222 34290314 34594039 37340002 38538606	GWAS catalog	Homologous recombination HDR through Homologous Recombination (HRR) Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA) +4 more
		RALB	Unknown	27117709	GWAS catalog	Ras signaling pathway Rap1 signaling pathway Phospholipase D signaling pathway +3 more
		RALY	Unknown	22976474 27197191 33893285 34290314	GWAS catalog	—
		RANBP9	Unknown	23535729 25751625 29059683 32139696	GWAS catalog	L1CAM interactions RAF/MAP kinase cascade MET activates RAS signaling
		RASA2	Unknown	29059683	GWAS catalog	MAPK signaling pathway Ras signaling pathway Viral carcinogenesis +1 more
		RBBP8	Unknown	29059683 32424353	GWAS catalog	Homologous recombination HDR through Single Strand Annealing (SSA) HDR through MMEJ (alt-NHEJ) +9 more
		RBFOX1	Unknown	40229280	GWAS catalog	—
		RBM20	Unknown	37340002	GWAS catalog	—
		RBMS1	Unknown	29059683 36929942	GWAS catalog	—
		RCCD1	Unknown	29059683 37340002	GWAS catalog	—
		RCE1	Unknown	29059683	GWAS catalog	Terpenoid backbone biosynthesis Ub-specific processing proteases
		RELL1	Unknown	40229280	GWAS catalog	Cytokine-cytokine receptor interaction
		RESF1	Unknown	38538606	GWAS catalog	—
		RGS10	Unknown	29059683	GWAS catalog	G alpha (i) signalling events
		RIGI	Unknown	29059683 37340002	GWAS catalog	—
		RIN2	Unknown	29059683	GWAS catalog	RAB GEFs exchange GTP for GDP on RABs
		RIN3	Unknown	25751625 29058716 29059683 32139696	GWAS catalog	RAB GEFs exchange GTP for GDP on RABs
		RIPK4	Unknown	38538606	GWAS catalog	—
		RNF115	Unknown	25751625 29059683 32139696	GWAS catalog	Antigen processing: Ubiquitination & Proteasome degradation
		RNF146	Unknown	18326623	GWAS catalog	TCF dependent signaling in response to WNT Degradation of AXIN Ub-specific processing proteases +1 more
		RNF19A	Unknown	29059683 34290314	GWAS catalog	Antigen processing: Ubiquitination & Proteasome degradation
		RNGTT	Unknown	38538606	GWAS catalog	mRNA surveillance pathway mRNA Capping RNA Pol II CTD phosphorylation and interaction with CE
		ROPN1L	Unknown	21424380	GWAS catalog	—
		RPLP2	Unknown	29059683 32139696	GWAS catalog	Ribosome Coronavirus disease - COVID-19 L13a-mediated translational silencing of Ceruloplasmin expression +7 more
		RREB1	Unknown	29059683 36929942 37340002	GWAS catalog	—
		RSL24D1	Unknown	40229280	GWAS catalog	Ribosome Coronavirus disease - COVID-19

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Breast cancer

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