Log in to save this analysis

Save This Analysis

Gene Gene information from NCBI Gene database.
Entrez ID 340252
Gene name Zinc finger protein 680
Gene symbol ZNF680
Synonyms (NCBI Gene)
-
Chromosome 7
Chromosome location 7q11.21
miRNA miRNA information provided by mirtarbase database.
587 Show/Hide all (587)
miRTarBase ID miRNA Experiments Reference
MIRT563032 hsa-miR-548e-5p PAR-CLIP 20371350
MIRT563031 hsa-miR-4724-5p PAR-CLIP 20371350
MIRT563030 hsa-miR-4519 PAR-CLIP 20371350
MIRT563029 hsa-miR-6826-5p PAR-CLIP 20371350
MIRT563028 hsa-miR-4310 PAR-CLIP 20371350
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
9 Show/Hide all (9)
GO ID Ontology Definition Evidence Reference
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0003677 Function DNA binding IEA
GO:0005634 Component Nucleus IEA
GO:0006355 Process Regulation of DNA-templated transcription IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8NEM1
Protein name Zinc finger protein 680
Protein function May be involved in transcriptional regulation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00096 zf-C2H2 378 → 400 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 490 → 512 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 238 → 260 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 182 → 204 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 350 → 372 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 322 → 344 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 406 → 428 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 434 → 456 Zinc finger, C2H2 type Domain
PF01352 KRAB 12 → 53 KRAB box Family
PF13912 zf-C2H2_6 294 → 319 Domain
PF13912 zf-C2H2_6 209 → 235 Domain
Sequence
MPGPPGSLEMGPLTFRDVAIEFSLEEWQCLDTAQRNLYRKVMFENYRNLVFLGIAVSKPH
LITCLEQGKEPWNRKRQEMVAKPPVIYSHFTEDLWPEHSIKDSFQKVILRGYGKCGHENL
QLRISCKSVDESKVFKEGYNELNQCLRTTQSKIFQCDKYVKVFHKFSNSNSHKKRNTGKK
VFKCKECGKSFCMLSHLTQHIRIHTRENSYKCEECGKVLNWFSELIKHKGIHMGEKPYKC
EECGKAFNQSSTLIKHKKIH
IEEKPFKCEECGKAFSLFSILSKHKIIHTGDKPYKCDECH
KAFNWFATLTNHKRIHTGE
KPFKCEECGKDFNQFSNLTKHKKIHTGEKPYKCEECGKAFN
QFANLTRHKKIH
TGEKSYKCEECGKAFIQSSNLTEHMRIHTGEKPYKCEECGKAFNGCSS
LTRHKRIH
TRENTYKCEECGKGFTLFSTLTNHKVIHTGEKSYKCDECGNVFNWPATLANH
KRIHAREKPYKCEECGKAFNRSSHLTRHKKIHTGEKLYKPEKCDNNFDNT
Sequence length 530
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
Reactome Pathway
Generic Transcription Pathway