ZNF547 (zinc finger protein 547)

Download as csv Download as pdf

Log in to bookmark this gene

Bookmark This Gene

Title Project / Tag (optional) Note (optional)

Cancel Save

On this page

Gene miRNA Gene ontology Other IDs Protein Pathways Related genes Diseases linked via similar genes

Gene

• Entrez ID: 284306
• Gene name: Zinc finger protein 547
• Gene symbol: ZNF547
• Synonyms (NCBI Gene): MIP-2A, SEDLP1, TRAPPC2.19, TRAPPC2B, TRAPPC2P1
• Chromosome: 19
• Chromosome location: 19q13.43

miRNA Show/Hide all (54)

miRTarBase ID	miRNA	Experiments	Reference
MIRT1528780	hsa-miR-148a	CLIP-seq
MIRT1528781	hsa-miR-148b	CLIP-seq
MIRT1528782	hsa-miR-152	CLIP-seq
MIRT1528783	hsa-miR-3168	CLIP-seq
MIRT1528784	hsa-miR-3646	CLIP-seq
MIRT1528785	hsa-miR-3660	CLIP-seq
MIRT1528786	hsa-miR-3662	CLIP-seq
MIRT1528787	hsa-miR-375	CLIP-seq
MIRT1528788	hsa-miR-3923	CLIP-seq
MIRT1528789	hsa-miR-409-3p	CLIP-seq
MIRT1528790	hsa-miR-4256	CLIP-seq
MIRT1528791	hsa-miR-4264	CLIP-seq
MIRT1528792	hsa-miR-4282	CLIP-seq
MIRT1528793	hsa-miR-4297	CLIP-seq
MIRT1528794	hsa-miR-4314	CLIP-seq
MIRT1528795	hsa-miR-4423-5p	CLIP-seq
MIRT1528796	hsa-miR-4455	CLIP-seq
MIRT1528797	hsa-miR-4526	CLIP-seq
MIRT1528798	hsa-miR-4643	CLIP-seq
MIRT1528799	hsa-miR-4762-3p	CLIP-seq
MIRT1528800	hsa-miR-4797-3p	CLIP-seq
MIRT1528801	hsa-miR-513a-3p	CLIP-seq
MIRT1528802	hsa-miR-609	CLIP-seq
MIRT1528803	hsa-miR-642b	CLIP-seq
MIRT1528804	hsa-miR-649	CLIP-seq
MIRT2159863	hsa-miR-30a	CLIP-seq
MIRT2159864	hsa-miR-30b	CLIP-seq
MIRT2159865	hsa-miR-30c	CLIP-seq
MIRT2159866	hsa-miR-30d	CLIP-seq
MIRT2159867	hsa-miR-30e	CLIP-seq
MIRT2159868	hsa-miR-4276	CLIP-seq
MIRT2159869	hsa-miR-4302	CLIP-seq
MIRT2159870	hsa-miR-4432	CLIP-seq
MIRT2159871	hsa-miR-4493	CLIP-seq
MIRT2159872	hsa-miR-4778-3p	CLIP-seq
MIRT2159873	hsa-miR-515-5p	CLIP-seq
MIRT2159874	hsa-miR-548u	CLIP-seq
MIRT2379236	hsa-let-7a	CLIP-seq
MIRT2379237	hsa-let-7b	CLIP-seq
MIRT2379238	hsa-let-7c	CLIP-seq
MIRT2379239	hsa-let-7d	CLIP-seq
MIRT2379240	hsa-let-7e	CLIP-seq
MIRT2379241	hsa-let-7f	CLIP-seq
MIRT2379242	hsa-let-7g	CLIP-seq
MIRT2379243	hsa-let-7i	CLIP-seq
MIRT2379244	hsa-miR-3927	CLIP-seq
MIRT2379245	hsa-miR-4257	CLIP-seq
MIRT2379246	hsa-miR-4458	CLIP-seq
MIRT2379247	hsa-miR-4500	CLIP-seq
MIRT2379248	hsa-miR-4676-5p	CLIP-seq
MIRT2379249	hsa-miR-4740-3p	CLIP-seq
MIRT2379250	hsa-miR-575	CLIP-seq
MIRT2379251	hsa-miR-628-5p	CLIP-seq
MIRT2379252	hsa-miR-98	CLIP-seq

Gene ontology (GO) Show/Hide all (11)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0003677	Function	DNA binding	IEA
GO:0003690	Function	Double-stranded DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0046872	Function	Metal ion binding	IEA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q8IVP9
• Protein name: Zinc finger protein 547
• Protein function: May be involved in transcriptional regulation.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00096	zf-C2H2	378 → 400	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	324 → 346	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	184 → 206	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	296 → 318	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	156 → 178	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	268 → 290	Zinc finger, C2H2 type	Domain
  PF01352	KRAB	10 → 51	KRAB box	Family

• Sequence:

  MAEMNPAQGHVVFEDVAIYFSQEEWGHLDEAQRLLYRDVMLENLALLSSLGCCHGAEDEE
  APLEPGVSVGVSQVMAPKPCLSTQNTQPCETCSSLLKDILRLAEHDGTHPEQGLYTCPAH
  LHQHQKEQIREKLSRGDGGRPTFVKNHRVHMAGKTFLCSECGKAFSHKHKLSDHQKIHTG
  ERTYKCSKCGILFMERSTLNRHQRTHTGERPYECNECGKAFLCKSHLVRHQTIHSGERPY
  ECSECGKLFMWSSTLITHQRVHTGKRPYGCSECGKFFKCNSNLFRHYRIHTGKRSYGCSE
  CGKFFMERSTLSRHQRVHTGERPYECNECGKFFSLKSVLIQHQRVHTGERPYECSECGKA
  FLTKSHLICHQTVHTAAKQCSECGKFFRYNSTLLRHQKVHTG

• Sequence length: 402

Pathways

Reactome Pathway:

Generic Transcription Pathway

Related Genes

No strongly related genes found yet for ZNF547.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to ZNF547.