ZNF416 (zinc finger protein 416)

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Gene miRNA Gene ontology Other IDs Protein Pathways Related genes Diseases linked via similar genes

Gene

• Entrez ID: 55659
• Gene name: Zinc finger protein 416
• Gene symbol: ZNF416
• Synonyms (NCBI Gene): -
• Chromosome: 19
• Chromosome location: 19q13.43

miRNA Show/Hide all (87)

miRTarBase ID	miRNA	Experiments	Reference
MIRT044380	hsa-miR-200c-3p	CLASH	23622248
MIRT496085	hsa-miR-4686	PAR-CLIP	22291592
MIRT496084	hsa-miR-6880-3p	PAR-CLIP	22291592
MIRT496083	hsa-miR-5001-3p	PAR-CLIP	22291592
MIRT496085	hsa-miR-4686	PAR-CLIP	22291592
MIRT496084	hsa-miR-6880-3p	PAR-CLIP	22291592
MIRT496083	hsa-miR-5001-3p	PAR-CLIP	22291592
MIRT1524036	hsa-miR-1237	CLIP-seq
MIRT1524037	hsa-miR-1238	CLIP-seq
MIRT1524038	hsa-miR-1245b-3p	CLIP-seq
MIRT1524039	hsa-miR-1254	CLIP-seq
MIRT1524040	hsa-miR-1323	CLIP-seq
MIRT1524041	hsa-miR-296-3p	CLIP-seq
MIRT1524042	hsa-miR-296-5p	CLIP-seq
MIRT1524043	hsa-miR-3116	CLIP-seq
MIRT1524044	hsa-miR-3129-3p	CLIP-seq
MIRT1524045	hsa-miR-3171	CLIP-seq
MIRT1524046	hsa-miR-3176	CLIP-seq
MIRT1524047	hsa-miR-3689a-3p	CLIP-seq
MIRT1524048	hsa-miR-3689c	CLIP-seq
MIRT1524049	hsa-miR-3922-3p	CLIP-seq
MIRT1524050	hsa-miR-3926	CLIP-seq
MIRT1524051	hsa-miR-3934	CLIP-seq
MIRT1524052	hsa-miR-4256	CLIP-seq
MIRT1524053	hsa-miR-4294	CLIP-seq
MIRT1524054	hsa-miR-4425	CLIP-seq
MIRT1524055	hsa-miR-4494	CLIP-seq
MIRT1524056	hsa-miR-4505	CLIP-seq
MIRT1524057	hsa-miR-4506	CLIP-seq
MIRT1524058	hsa-miR-4691-5p	CLIP-seq
MIRT1524059	hsa-miR-4704-3p	CLIP-seq
MIRT1524060	hsa-miR-4718	CLIP-seq
MIRT1524061	hsa-miR-4728-3p	CLIP-seq
MIRT1524062	hsa-miR-499a-5p	CLIP-seq
MIRT1524063	hsa-miR-548a-3p	CLIP-seq
MIRT1524064	hsa-miR-548e	CLIP-seq
MIRT1524065	hsa-miR-548f	CLIP-seq
MIRT1524066	hsa-miR-548o	CLIP-seq
MIRT1524067	hsa-miR-548s	CLIP-seq
MIRT1524068	hsa-miR-552	CLIP-seq
MIRT1524069	hsa-miR-582-3p	CLIP-seq
MIRT1524070	hsa-miR-601	CLIP-seq
MIRT1524071	hsa-miR-661	CLIP-seq
MIRT1524072	hsa-miR-767-3p	CLIP-seq
MIRT1524041	hsa-miR-296-3p	CLIP-seq
MIRT1524047	hsa-miR-3689a-3p	CLIP-seq
MIRT1524048	hsa-miR-3689c	CLIP-seq
MIRT1524054	hsa-miR-4425	CLIP-seq
MIRT1524058	hsa-miR-4691-5p	CLIP-seq
MIRT2377866	hsa-miR-1205	CLIP-seq
MIRT2377867	hsa-miR-1266	CLIP-seq
MIRT2377868	hsa-miR-141	CLIP-seq
MIRT2377869	hsa-miR-183	CLIP-seq
MIRT2377870	hsa-miR-200a	CLIP-seq
MIRT1524041	hsa-miR-296-3p	CLIP-seq
MIRT2377871	hsa-miR-3119	CLIP-seq
MIRT1524044	hsa-miR-3129-3p	CLIP-seq
MIRT2377872	hsa-miR-3185	CLIP-seq
MIRT2377873	hsa-miR-3617	CLIP-seq
MIRT2377874	hsa-miR-3651	CLIP-seq
MIRT2377875	hsa-miR-3664-3p	CLIP-seq
MIRT2377876	hsa-miR-3665	CLIP-seq
MIRT1524047	hsa-miR-3689a-3p	CLIP-seq
MIRT1524048	hsa-miR-3689c	CLIP-seq
MIRT2377877	hsa-miR-3938	CLIP-seq
MIRT1524052	hsa-miR-4256	CLIP-seq
MIRT1524053	hsa-miR-4294	CLIP-seq
MIRT1524054	hsa-miR-4425	CLIP-seq
MIRT2377878	hsa-miR-4464	CLIP-seq
MIRT1524057	hsa-miR-4506	CLIP-seq
MIRT2377879	hsa-miR-4518	CLIP-seq
MIRT2377880	hsa-miR-4521	CLIP-seq
MIRT1524058	hsa-miR-4691-5p	CLIP-seq
MIRT2377881	hsa-miR-4748	CLIP-seq
MIRT2377882	hsa-miR-641	CLIP-seq
MIRT2377883	hsa-miR-657	CLIP-seq
MIRT2377884	hsa-miR-670	CLIP-seq
MIRT2670230	hsa-miR-205	CLIP-seq
MIRT2670231	hsa-miR-2682	CLIP-seq
MIRT2377874	hsa-miR-3651	CLIP-seq
MIRT2670232	hsa-miR-4423-3p	CLIP-seq
MIRT2670233	hsa-miR-4448	CLIP-seq
MIRT2670234	hsa-miR-449c	CLIP-seq
MIRT2670235	hsa-miR-4719	CLIP-seq
MIRT2670236	hsa-miR-513b	CLIP-seq
MIRT1524070	hsa-miR-601	CLIP-seq
MIRT2670237	hsa-miR-940	CLIP-seq

Gene ontology (GO) Show/Hide all (9)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0003677	Function	DNA binding	IEA
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0046872	Function	Metal ion binding	IEA

Other IDs

• MIM: 621253
• HGNC: 20645
• e!Ensembl: ENSG00000083817

Protein

• UniProt ID: Q9BWM5
• Protein name: Zinc finger protein 416
• Protein function: May be involved in transcriptional regulation.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00096	zf-C2H2	354 → 376	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	270 → 292	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	298 → 320	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	466 → 488	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	326 → 348	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	438 → 460	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	382 → 404	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	550 → 572	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	494 → 516	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	522 → 544	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	410 → 432	Zinc finger, C2H2 type	Domain
  PF01352	KRAB	27 → 67	KRAB box	Family

• Sequence:

  MAAAVLRDSTSVPVTAEAKLMGFTQGCVTFEDVAIYFSQEEWGLLDEAQRLLYRDVMLEN
  FALITALVCWHGMEDEETPEQSVSVEGVPQVRTPEASPSTQKIQSCDMCVPFLTDILHLT
  DLPGQELYLTGACAVFHQDQKHHSAEKPLESDMDKASFVQCCLFHESGMPFTSSEVGKDF
  LAPLGILQPQAIANYEKPNKISKCEEAFHVGISHYKWSQCRRESSHKHTFFHPRVCTGKR
  LYESSKCGKACCCECSLVQLQRVHPGERPYECSECGKSFSQTSHLNDHRRIHTGERPYVC
  GQCGKSFSQRATLIKHHRVHTGERPYECGECGKSFSQSSNLIEHCRIHTGERPYECDECG
  KAFGSKSTLVRHQRTHTGEKPYECGECGKLFRQSFSLVVHQRIHTTARPYECGQCGKSFS
  LKCGLIQHQLIHSGARPFECDECGKSFSQRTTLNKHHKVHTAERPYVCGECGKAFMFKSK
  LVRHQRTHTGERPFECSECGKFFRQSYTLVEHQKIHTGLRPYDCGQCGKSFIQKSSLIQH
  QVVHTGERPYECGKCGKSFTQHSGLILHRKSHTVERPRDSSKCGKPYSPRSNIV

• Sequence length: 594

Pathways

Reactome Pathway:

Generic Transcription Pathway

Related Genes

No strongly related genes found yet for ZNF416.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to ZNF416.