ZNF213 (zinc finger protein 213)

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Gene miRNA Gene ontology Other IDs Protein Pathways Related genes Diseases linked via similar genes

Gene

• Entrez ID: 7760
• Gene name: Zinc finger protein 213
• Gene symbol: ZNF213
• Synonyms (NCBI Gene): CR53, ZKSCAN21, ZSCAN53
• Chromosome: 16
• Chromosome location: 16p13.3
• Summary: C2H2 zinc finger proteins, such as ZNF213, have bipartite structures in which one domain binds DNA or RNA and the other modulates target gene expression.[supplied by OMIM, Apr 2004]

miRNA Show/Hide all (127)

miRTarBase ID	miRNA	Experiments	Reference
MIRT1518109	hsa-miR-1180	CLIP-seq
MIRT1518110	hsa-miR-122	CLIP-seq
MIRT1518111	hsa-miR-1294	CLIP-seq
MIRT1518112	hsa-miR-2861	CLIP-seq
MIRT1518113	hsa-miR-296-3p	CLIP-seq
MIRT1518114	hsa-miR-3125	CLIP-seq
MIRT1518115	hsa-miR-3134	CLIP-seq
MIRT1518116	hsa-miR-3916	CLIP-seq
MIRT1518117	hsa-miR-3925-3p	CLIP-seq
MIRT1518118	hsa-miR-3928	CLIP-seq
MIRT1518119	hsa-miR-4271	CLIP-seq
MIRT1518120	hsa-miR-4473	CLIP-seq
MIRT1518121	hsa-miR-4496	CLIP-seq
MIRT1518122	hsa-miR-4534	CLIP-seq
MIRT1518123	hsa-miR-4664-3p	CLIP-seq
MIRT1518124	hsa-miR-4685-5p	CLIP-seq
MIRT1518125	hsa-miR-4725-3p	CLIP-seq
MIRT1518126	hsa-miR-4757-5p	CLIP-seq
MIRT1518127	hsa-miR-512-3p	CLIP-seq
MIRT1518128	hsa-miR-520f	CLIP-seq
MIRT1518129	hsa-miR-766	CLIP-seq
MIRT1518110	hsa-miR-122	CLIP-seq
MIRT1518130	hsa-miR-1245	CLIP-seq
MIRT1518131	hsa-miR-1293	CLIP-seq
MIRT1518111	hsa-miR-1294	CLIP-seq
MIRT1518132	hsa-miR-1302	CLIP-seq
MIRT1518133	hsa-miR-1825	CLIP-seq
MIRT1518115	hsa-miR-3134	CLIP-seq
MIRT1518134	hsa-miR-3151	CLIP-seq
MIRT1518135	hsa-miR-3180	CLIP-seq
MIRT1518136	hsa-miR-3180-3p	CLIP-seq
MIRT1518137	hsa-miR-3196	CLIP-seq
MIRT1518138	hsa-miR-3682-3p	CLIP-seq
MIRT1518139	hsa-miR-371-3p	CLIP-seq
MIRT1518140	hsa-miR-371b-3p	CLIP-seq
MIRT1518141	hsa-miR-4298	CLIP-seq
MIRT1518120	hsa-miR-4473	CLIP-seq
MIRT1518142	hsa-miR-4481	CLIP-seq
MIRT1518143	hsa-miR-4483	CLIP-seq
MIRT1518144	hsa-miR-4487	CLIP-seq
MIRT1518122	hsa-miR-4534	CLIP-seq
MIRT1518145	hsa-miR-4536	CLIP-seq
MIRT1518146	hsa-miR-4638-3p	CLIP-seq
MIRT1518147	hsa-miR-4648	CLIP-seq
MIRT1518148	hsa-miR-4651	CLIP-seq
MIRT1518149	hsa-miR-4671-3p	CLIP-seq
MIRT1518150	hsa-miR-4736	CLIP-seq
MIRT1518151	hsa-miR-4745-5p	CLIP-seq
MIRT1518152	hsa-miR-4781-5p	CLIP-seq
MIRT1518153	hsa-miR-486-3p	CLIP-seq
MIRT1518127	hsa-miR-512-3p	CLIP-seq
MIRT1518154	hsa-miR-515-3p	CLIP-seq
MIRT1518155	hsa-miR-519e	CLIP-seq
MIRT1518128	hsa-miR-520f	CLIP-seq
MIRT1518156	hsa-miR-608	CLIP-seq
MIRT1518144	hsa-miR-4487	CLIP-seq
MIRT1555786	hsa-miR-4633-3p	CLIP-seq
MIRT1518110	hsa-miR-122	CLIP-seq
MIRT1518130	hsa-miR-1245	CLIP-seq
MIRT2156395	hsa-miR-1268	CLIP-seq
MIRT2156396	hsa-miR-1268b	CLIP-seq
MIRT2156397	hsa-miR-150	CLIP-seq
MIRT1518115	hsa-miR-3134	CLIP-seq
MIRT1518134	hsa-miR-3151	CLIP-seq
MIRT2156398	hsa-miR-3157-3p	CLIP-seq
MIRT2156399	hsa-miR-3184	CLIP-seq
MIRT2156400	hsa-miR-331-3p	CLIP-seq
MIRT2156401	hsa-miR-338-3p	CLIP-seq
MIRT2156402	hsa-miR-3621	CLIP-seq
MIRT2156403	hsa-miR-3689d	CLIP-seq
MIRT1518139	hsa-miR-371-3p	CLIP-seq
MIRT1518140	hsa-miR-371b-3p	CLIP-seq
MIRT2156404	hsa-miR-3943	CLIP-seq
MIRT2156405	hsa-miR-423-5p	CLIP-seq
MIRT2156406	hsa-miR-4292	CLIP-seq
MIRT2156407	hsa-miR-4313	CLIP-seq
MIRT2156408	hsa-miR-4436b-3p	CLIP-seq
MIRT2156409	hsa-miR-4443	CLIP-seq
MIRT1518120	hsa-miR-4473	CLIP-seq
MIRT1518142	hsa-miR-4481	CLIP-seq
MIRT2156410	hsa-miR-4486	CLIP-seq
MIRT1518144	hsa-miR-4487	CLIP-seq
MIRT2156411	hsa-miR-4530	CLIP-seq
MIRT1518122	hsa-miR-4534	CLIP-seq
MIRT1555786	hsa-miR-4633-3p	CLIP-seq
MIRT2156412	hsa-miR-4649-3p	CLIP-seq
MIRT1518149	hsa-miR-4671-3p	CLIP-seq
MIRT2156413	hsa-miR-4716-3p	CLIP-seq
MIRT2156414	hsa-miR-4723-5p	CLIP-seq
MIRT1518150	hsa-miR-4736	CLIP-seq
MIRT1518151	hsa-miR-4745-5p	CLIP-seq
MIRT1518153	hsa-miR-486-3p	CLIP-seq
MIRT1518127	hsa-miR-512-3p	CLIP-seq
MIRT1518154	hsa-miR-515-3p	CLIP-seq
MIRT1518155	hsa-miR-519e	CLIP-seq
MIRT1518128	hsa-miR-520f	CLIP-seq
MIRT2156415	hsa-miR-548q	CLIP-seq
MIRT2156416	hsa-miR-585	CLIP-seq
MIRT2156417	hsa-miR-637	CLIP-seq
MIRT2156418	hsa-miR-874	CLIP-seq
MIRT2156419	hsa-miR-938	CLIP-seq
MIRT1518130	hsa-miR-1245	CLIP-seq
MIRT1518131	hsa-miR-1293	CLIP-seq
MIRT2375968	hsa-miR-1827	CLIP-seq
MIRT1518115	hsa-miR-3134	CLIP-seq
MIRT2375969	hsa-miR-3612	CLIP-seq
MIRT1518138	hsa-miR-3682-3p	CLIP-seq
MIRT2375970	hsa-miR-4433	CLIP-seq
MIRT2375971	hsa-miR-4459	CLIP-seq
MIRT1518142	hsa-miR-4481	CLIP-seq
MIRT1518143	hsa-miR-4483	CLIP-seq
MIRT1518122	hsa-miR-4534	CLIP-seq
MIRT1518145	hsa-miR-4536	CLIP-seq
MIRT2375972	hsa-miR-4695-5p	CLIP-seq
MIRT1518151	hsa-miR-4745-5p	CLIP-seq
MIRT2375973	hsa-miR-4768-3p	CLIP-seq
MIRT2375974	hsa-miR-650	CLIP-seq
MIRT2397468	hsa-miR-1	CLIP-seq
MIRT2397469	hsa-miR-206	CLIP-seq
MIRT2397470	hsa-miR-3147	CLIP-seq
MIRT2397471	hsa-miR-4260	CLIP-seq
MIRT2397472	hsa-miR-4283	CLIP-seq
MIRT2397473	hsa-miR-4425	CLIP-seq
MIRT2397474	hsa-miR-4489	CLIP-seq
MIRT2397475	hsa-miR-4722-3p	CLIP-seq
MIRT2397476	hsa-miR-4755-3p	CLIP-seq
MIRT2397477	hsa-miR-613	CLIP-seq

Gene ontology (GO) Show/Hide all (9)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0003677	Function	DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	32296183, 33961781
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0046872	Function	Metal ion binding	IEA

Other IDs

• MIM: 608387
• HGNC: 13005
• e!Ensembl: ENSG00000085644

Protein

• UniProt ID: O14771
• Protein name: Zinc finger protein 213 (Putative transcription factor CR53) (Zinc finger protein with KRAB and SCAN domains 21)
• Protein function: May be involved in transcriptional regulation.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00096	zf-C2H2	345 → 367	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	373 → 395	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	429 → 451	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	401 → 423	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	317 → 339	Zinc finger, C2H2 type	Domain
  PF01352	KRAB	201 → 240	KRAB box	Family
  PF02023	SCAN	41 → 130	SCAN domain	Domain

• Tissue specificity: TISSUE SPECIFICITY: Widely expressed with highest levels in testis. {ECO:0000269|PubMed:10023065}.
• Sequence:

  MAAPLEAQDQAPGEGEGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGDVHGPH
  EAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGEEAVALV
  EDLQKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPSVPQEQHSHSAQPPAL
  LKEGRPGETTDTCFVSGVHGPVALGDIPFYFSREEWGTLDPAQRDLFWDIKRENSRNTTL
  GFGLKGQSEKSLLQEMVPVVPGQTGSDVTVSWSPEEAEAWESENRPRAALGPVVGARRGR
  PPTRRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEKPHKCPECDKSFRSSSDL
  VRHQGVHTGEKPFSCSECGKSFSRSAYLADHQRIHTGEKPFGCSDCGKSFSLRSYLLDHR
  RVHTGERPFGCGECDKSFKQRAHLIAHQSLHAKMAQPVG

• Sequence length: 459

Pathways

Reactome Pathway:

Generic Transcription Pathway

Related Genes

No strongly related genes found yet for ZNF213.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to ZNF213.