ZIM3 (zinc finger imprinted 3)

Download as csv Download as pdf

Log in to bookmark this gene

Bookmark This Gene

Title Project / Tag (optional) Note (optional)

Cancel Save

On this page

Gene miRNA Gene ontology Other IDs Protein Pathways Related genes Diseases linked via similar genes

Gene

• Entrez ID: 114026
• Gene name: Zinc finger imprinted 3
• Gene symbol: ZIM3
• Synonyms (NCBI Gene): ZNF264, ZNF657
• Chromosome: 19
• Chromosome location: 19q13.43

miRNA Show/Hide all (97)

miRTarBase ID	miRNA	Experiments	Reference
MIRT1513623	hsa-miR-138	CLIP-seq
MIRT1513624	hsa-miR-185	CLIP-seq
MIRT1513625	hsa-miR-197	CLIP-seq
MIRT1513626	hsa-miR-205	CLIP-seq
MIRT1513627	hsa-miR-3663-5p	CLIP-seq
MIRT1513628	hsa-miR-3664-3p	CLIP-seq
MIRT1513629	hsa-miR-4306	CLIP-seq
MIRT1513630	hsa-miR-4423-5p	CLIP-seq
MIRT1513631	hsa-miR-4433	CLIP-seq
MIRT1513632	hsa-miR-4459	CLIP-seq
MIRT1513633	hsa-miR-4514	CLIP-seq
MIRT1513634	hsa-miR-4532	CLIP-seq
MIRT1513635	hsa-miR-4644	CLIP-seq
MIRT1513636	hsa-miR-4645-5p	CLIP-seq
MIRT1513637	hsa-miR-4673	CLIP-seq
MIRT1513638	hsa-miR-4692	CLIP-seq
MIRT1513639	hsa-miR-4716-5p	CLIP-seq
MIRT1513640	hsa-miR-4722-5p	CLIP-seq
MIRT1513641	hsa-miR-4724-3p	CLIP-seq
MIRT1513642	hsa-miR-4768-3p	CLIP-seq
MIRT1513643	hsa-miR-4781-3p	CLIP-seq
MIRT1513644	hsa-miR-5096	CLIP-seq
MIRT1513645	hsa-miR-940	CLIP-seq
MIRT2154798	hsa-miR-1254	CLIP-seq
MIRT2154799	hsa-miR-1976	CLIP-seq
MIRT2154800	hsa-miR-3116	CLIP-seq
MIRT2154801	hsa-miR-4279	CLIP-seq
MIRT1513634	hsa-miR-4532	CLIP-seq
MIRT2154802	hsa-miR-4633-5p	CLIP-seq
MIRT2154803	hsa-miR-4722-3p	CLIP-seq
MIRT2154804	hsa-miR-4735-5p	CLIP-seq
MIRT2154805	hsa-miR-4775	CLIP-seq
MIRT2154806	hsa-miR-4794	CLIP-seq
MIRT2154807	hsa-miR-5095	CLIP-seq
MIRT2154808	hsa-miR-532-5p	CLIP-seq
MIRT2154809	hsa-miR-548n	CLIP-seq
MIRT2154810	hsa-miR-548t	CLIP-seq
MIRT2154811	hsa-miR-552	CLIP-seq
MIRT2154812	hsa-miR-590-3p	CLIP-seq
MIRT2154813	hsa-miR-661	CLIP-seq
MIRT2154814	hsa-miR-764	CLIP-seq
MIRT2374812	hsa-miR-1224-3p	CLIP-seq
MIRT2374813	hsa-miR-1915	CLIP-seq
MIRT1513625	hsa-miR-197	CLIP-seq
MIRT2154799	hsa-miR-1976	CLIP-seq
MIRT2374814	hsa-miR-3149	CLIP-seq
MIRT2374815	hsa-miR-3529	CLIP-seq
MIRT2374816	hsa-miR-379	CLIP-seq
MIRT2154801	hsa-miR-4279	CLIP-seq
MIRT2374817	hsa-miR-4451	CLIP-seq
MIRT1513634	hsa-miR-4532	CLIP-seq
MIRT2374818	hsa-miR-4650-3p	CLIP-seq
MIRT1513639	hsa-miR-4716-5p	CLIP-seq
MIRT2154803	hsa-miR-4722-3p	CLIP-seq
MIRT2374819	hsa-miR-4726-3p	CLIP-seq
MIRT2374820	hsa-miR-4772-3p	CLIP-seq
MIRT1513643	hsa-miR-4781-3p	CLIP-seq
MIRT2374821	hsa-miR-4787-3p	CLIP-seq
MIRT2374822	hsa-miR-498	CLIP-seq
MIRT2154807	hsa-miR-5095	CLIP-seq
MIRT1513644	hsa-miR-5096	CLIP-seq
MIRT2154811	hsa-miR-552	CLIP-seq
MIRT2154814	hsa-miR-764	CLIP-seq
MIRT2154798	hsa-miR-1254	CLIP-seq
MIRT2374813	hsa-miR-1915	CLIP-seq
MIRT2154800	hsa-miR-3116	CLIP-seq
MIRT2374814	hsa-miR-3149	CLIP-seq
MIRT2374815	hsa-miR-3529	CLIP-seq
MIRT2374816	hsa-miR-379	CLIP-seq
MIRT2374817	hsa-miR-4451	CLIP-seq
MIRT2154802	hsa-miR-4633-5p	CLIP-seq
MIRT2374818	hsa-miR-4650-3p	CLIP-seq
MIRT2374819	hsa-miR-4726-3p	CLIP-seq
MIRT2154804	hsa-miR-4735-5p	CLIP-seq
MIRT2154805	hsa-miR-4775	CLIP-seq
MIRT2154806	hsa-miR-4794	CLIP-seq
MIRT2374822	hsa-miR-498	CLIP-seq
MIRT2154808	hsa-miR-532-5p	CLIP-seq
MIRT2154812	hsa-miR-590-3p	CLIP-seq
MIRT2154813	hsa-miR-661	CLIP-seq
MIRT2154798	hsa-miR-1254	CLIP-seq
MIRT2374813	hsa-miR-1915	CLIP-seq
MIRT2154800	hsa-miR-3116	CLIP-seq
MIRT2374814	hsa-miR-3149	CLIP-seq
MIRT2374815	hsa-miR-3529	CLIP-seq
MIRT2374816	hsa-miR-379	CLIP-seq
MIRT2374817	hsa-miR-4451	CLIP-seq
MIRT2154802	hsa-miR-4633-5p	CLIP-seq
MIRT2374818	hsa-miR-4650-3p	CLIP-seq
MIRT2374819	hsa-miR-4726-3p	CLIP-seq
MIRT2154804	hsa-miR-4735-5p	CLIP-seq
MIRT2154805	hsa-miR-4775	CLIP-seq
MIRT2154806	hsa-miR-4794	CLIP-seq
MIRT2374822	hsa-miR-498	CLIP-seq
MIRT2154808	hsa-miR-532-5p	CLIP-seq
MIRT2154812	hsa-miR-590-3p	CLIP-seq
MIRT2154813	hsa-miR-661	CLIP-seq

Gene ontology (GO) Show/Hide all (12)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0003677	Function	DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0010468	Process	Regulation of gene expression	IEA
GO:0046872	Function	Metal ion binding	IEA
GO:0080090	Process	Regulation of primary metabolic process	IEA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q96PE6
• Protein name: Zinc finger imprinted 3 (Zinc finger protein 657)
• Protein function: May be involved in transcriptional regulation.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF00096	zf-C2H2	307 → 329	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	279 → 301	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	447 → 470	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	391 → 413	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	223 → 245	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	419 → 441	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	335 → 357	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	363 → 385	Zinc finger, C2H2 type	Domain
  PF01352	KRAB	7 → 48	KRAB box	Family

• Sequence:

  MNNSQGRVTFEDVTVNFTQGEWQRLNPEQRNLYRDVMLENYSNLVSVGQGETTKPDVILR
  LEQGKEPWLEEEEVLGSGRAEKNGDIGGQIWKPKDVKESLAREVPSINKETLTTQKGVEC
  DGSKKILPLGIDDVSSLQHYVQNNSHDDNGYRKLVGNNPSKFVGQQLKCNACRKLFSSKS
  RLQSHLRRHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKCENCGNAYKQKSNLFQ
  HQKMHTKEKPYQCKTCGKAFSWKSSCINHEKIHNAKKSYQCNECEKSFRQNSTLIQHKKV
  HTGQKPFQCTDCGKAFIYKSDLVKHQRIHTGEKPYKCSICEKAFSQKSNVIDHEKIHTGK
  RAYECDLCGNTFIQKKNLIQHKKIHTGEKPYECNRCGKAFFQKSNLHSHQKTHSGERTYR
  CSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAFADRSYLVRHQKRIHSR

• Sequence length: 472

Pathways

Reactome Pathway:

Generic Transcription Pathway

Related Genes

No strongly related genes found yet for ZIM3.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to ZIM3.