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Gene Gene information from NCBI Gene database.
Entrez ID 340547
Gene name V-set and immunoglobulin domain containing 1
Gene symbol VSIG1
Synonyms (NCBI Gene)
1700062D20RikGPA34dJ889N15.1
Chromosome X
Chromosome location Xq22.3
Summary This gene encodes a member of the junctional adhesion molecule (JAM) family. The encoded protein contains multiple glycosylation sites at the N-terminal region, and multiple phosphorylation sites and glutamic acid/proline (EP) repeats at the C-terminal re
miRNA miRNA information provided by mirtarbase database.
465 Show/Hide all (465)
miRTarBase ID miRNA Experiments Reference
MIRT021542 hsa-miR-142-3p Microarray 17612493
MIRT676573 hsa-miR-1306-5p HITS-CLIP 23824327
MIRT676572 hsa-miR-6890-3p HITS-CLIP 23824327
MIRT676567 hsa-miR-6741-3p HITS-CLIP 23824327
MIRT676566 hsa-miR-1304-3p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
7 Show/Hide all (7)
GO ID Ontology Definition Evidence Reference
GO:0003382 Process Epithelial cell morphogenesis IEA
GO:0005515 Function Protein binding IPI 32296183
GO:0005886 Component Plasma membrane IEA
GO:0016020 Component Membrane IEA
GO:0016323 Component Basolateral plasma membrane IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
300620 28675 ENSG00000101842
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q86XK7
Protein name V-set and immunoglobulin domain-containing protein 1 (Cell surface A33 antigen) (Glycoprotein A34)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07686 V-set 27 → 137 Immunoglobulin V-set domain Domain
PF13927 Ig_3 142 → 215 Domain
Tissue specificity TISSUE SPECIFICITY: Detected only in stomach mucosa and testis, and to a much lesser level in pancreas (at protein level). Detected in gastric cancers (31%), esophageal carcinomas (50%) and ovarian cancers (23%). {ECO:0000269|PubMed:16405301}.
Sequence
MVFAFWKVFLILSCLAGQVSVVQVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWS
FFHKKEMEPISIYFSQGGQAVAIGQFKDRITGSNDPGNASITISHMQPADSGIYICDVNN
PPDFLGQNQGILNVSVL
VKPSKPLCSVQGRPETGHTISLSCLSALGTPSPVYYWHKLEGR
DIVPVKENFNPTTGILVIGNLTNFEQGYYQCTAIN
RLGNSSCEIDLTSSHPEVGIIVGAL
IGSLVGAAIIISVVCFARNKAKAKAKERNSKTIAELEPMTKINPRGESEAMPREDATQLE
VTLPSSIHETGPDTIQEPDYEPKPTQEPAPEPAPGSEPMAVPDLDIELELEPETQSELEP
EPEPEPESEPGVVVEPLSEDEKGVVKA
Sequence length 387
Interactions View interactions