Log in to save this analysis

Save This Analysis

Gene Gene information from NCBI Gene database.
Entrez ID 147166
Gene name Tripartite motif containing 16 like (pseudogene)
Gene symbol TRIM16L
Synonyms (NCBI Gene)
TRIM70
Chromosome 17
Chromosome location 17p11.2
miRNA miRNA information provided by mirtarbase database.
250 Show/Hide all (250)
miRTarBase ID miRNA Experiments Reference
MIRT044031 hsa-miR-365a-3p CLASH 23622248
MIRT041510 hsa-miR-193b-3p CLASH 23622248
MIRT643384 hsa-miR-508-5p HITS-CLIP 23824327
MIRT643383 hsa-miR-4709-5p HITS-CLIP 23824327
MIRT643382 hsa-miR-1273g-3p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
2
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 28514442, 33961781
GO:0005737 Component Cytoplasm IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q309B1
Protein name Tripartite motif-containing protein 16-like protein (Tripartite motif-containing protein 70)
PDB 6SJH
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00622 SPRY 212 → 333 SPRY domain Family
PF13765 PRY 159 → 208 SPRY-associated domain Family
Sequence
MQFGELLAAVRKAQANVMLFLEEKEQAALSQANGIKAHLEYRSAEMEKSKQELETMAAIS
NTVQFLEEYCKFKNTEDITFPSVYIGLKDKLSGIRKVITESTVHLIQLLENYKKKLQEFS
KEEEYDIRTQVSAIVQRKYWTSKPEPSTREQFLQYVHDITFDPDTAHKYLRLQEENRKVT
NTTPWEHPYPDLPSRFLHWRQVLSQQSL
YLHRYYFEVEIFGAGTYVGLTCKGIDQKGEER
SSCISGNNFSWSLQWNGKEFTAWYSDMETPLKAGPFWRLGVYIDFPGGILSFYGVEYDSM
TLVHKFACKFSEPVYAAFWLSKKENAIRIVDLG
EEPEKPAPSLVGTAP
Sequence length 348
Interactions View interactions