TRAPPC13 (trafficking protein particle complex subunit 13)

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Gene miRNA Gene ontology Other IDs Protein Pathways Related genes Diseases linked via similar genes

Gene

• Entrez ID: 80006
• Gene name: Trafficking protein particle complex subunit 13
• Gene symbol: TRAPPC13
• Synonyms (NCBI Gene): C5orf44, SHLD3
• Chromosome: 5
• Chromosome location: 5q12.3

miRNA Show/Hide all (29)

miRTarBase ID	miRNA	Experiments	Reference
MIRT020635	hsa-miR-155-5p	Other	20584899
MIRT029007	hsa-miR-26b-5p	Microarray	19088304
MIRT048924	hsa-miR-92a-3p	CLASH	23622248
MIRT644133	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT644132	hsa-miR-138-2-3p	HITS-CLIP	23824327
MIRT644131	hsa-miR-5696	HITS-CLIP	23824327
MIRT644130	hsa-miR-579-3p	HITS-CLIP	23824327
MIRT644129	hsa-miR-664b-3p	HITS-CLIP	23824327
MIRT644128	hsa-miR-6844	HITS-CLIP	23824327
MIRT644127	hsa-miR-7159-3p	HITS-CLIP	23824327
MIRT644126	hsa-miR-4482-3p	HITS-CLIP	23824327
MIRT644125	hsa-miR-6875-3p	HITS-CLIP	23824327
MIRT644124	hsa-miR-4659a-3p	HITS-CLIP	23824327
MIRT644123	hsa-miR-4659b-3p	HITS-CLIP	23824327
MIRT444940	hsa-miR-3653-3p	PAR-CLIP	22100165
MIRT444939	hsa-miR-1273e	PAR-CLIP	22100165
MIRT644133	hsa-miR-153-5p	HITS-CLIP	23824327
MIRT644132	hsa-miR-138-2-3p	HITS-CLIP	23824327
MIRT644131	hsa-miR-5696	HITS-CLIP	23824327
MIRT644130	hsa-miR-579-3p	HITS-CLIP	23824327
MIRT644129	hsa-miR-664b-3p	HITS-CLIP	23824327
MIRT644128	hsa-miR-6844	HITS-CLIP	23824327
MIRT644127	hsa-miR-7159-3p	HITS-CLIP	23824327
MIRT644126	hsa-miR-4482-3p	HITS-CLIP	23824327
MIRT644125	hsa-miR-6875-3p	HITS-CLIP	23824327
MIRT644124	hsa-miR-4659a-3p	HITS-CLIP	23824327
MIRT644123	hsa-miR-4659b-3p	HITS-CLIP	23824327
MIRT444940	hsa-miR-3653-3p	PAR-CLIP	22100165
MIRT444939	hsa-miR-1273e	PAR-CLIP	22100165

Gene ontology (GO) Show/Hide all (8)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	21453443, 33961781
GO:0005737	Component	Cytoplasm	NAS	27066478
GO:0005829	Component	Cytosol	TAS
GO:0006888	Process	Endoplasmic reticulum to Golgi vesicle-mediated transport	NAS	27066478
GO:0006901	Process	Vesicle coating	NAS	27066478
GO:0099022	Process	Vesicle tethering	NAS	27066478
GO:1990071	Component	TRAPPII protein complex	NAS	27066478
GO:1990072	Component	TRAPPIII protein complex	IBA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: A5PLN9
• Protein name: Trafficking protein particle complex subunit 13
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF06159	DUF974	65 → 298	Protein of unknown function (DUF974)	Family

• Sequence:

  MEVNPPKQEHLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLFNQLMRDDPSTVNGAEVLM
  LGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQRLNLSASNAAVA
  ELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKFFKFQVLKPLDVKTKFYN
  AESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMYNVTELNSVSQAGECVSTFGSR
  AYLQPMDTRQYLYCLKPKNEFAEKAGIIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMA
  PGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERTMDLVLEMCNTNSIHWCGISGRQLG
  KLHPSSSLCLALTLLSSVQGLQSISGLRLTDTFLKRTYEYDDIAQVCVVSSAIKVES

• Sequence length: 417

Pathways

Reactome Pathway:

RAB GEFs exchange GTP for GDP on RABs

Related Genes

No strongly related genes found yet for TRAPPC13.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to TRAPPC13.