Gene Gene information from NCBI Gene database. Download as csv Download as pdf
Entrez ID	9881
Gene name	Tetratricopeptide repeat and ankyrin repeat containing 1
Gene symbol	TRANK1
Synonyms (NCBI Gene)	LBA1
Chromosome	3
Chromosome location	3p22.2

116 Show/Hide all (116)

miRTarBase ID	miRNA	Experiments	Reference
MIRT018157	hsa-miR-335-5p	Microarray	18185580
MIRT029736	hsa-miR-26b-5p	Microarray	19088304
MIRT1451652	hsa-miR-1202	CLIP-seq
MIRT1451653	hsa-miR-1255a	CLIP-seq
MIRT1451654	hsa-miR-1255b	CLIP-seq
MIRT1451655	hsa-miR-1297	CLIP-seq
MIRT1451656	hsa-miR-1343	CLIP-seq
MIRT1451657	hsa-miR-23a	CLIP-seq
MIRT1451658	hsa-miR-23b	CLIP-seq
MIRT1451659	hsa-miR-23c	CLIP-seq
MIRT1451660	hsa-miR-26a	CLIP-seq
MIRT1451661	hsa-miR-26b	CLIP-seq
MIRT1451662	hsa-miR-28-3p	CLIP-seq
MIRT1451663	hsa-miR-3074-5p	CLIP-seq
MIRT1451664	hsa-miR-3126-5p	CLIP-seq
MIRT1451665	hsa-miR-3133	CLIP-seq
MIRT1451666	hsa-miR-3136-3p	CLIP-seq
MIRT1451667	hsa-miR-3202	CLIP-seq
MIRT1451668	hsa-miR-3662	CLIP-seq
MIRT1451669	hsa-miR-3972	CLIP-seq
MIRT1451670	hsa-miR-3976	CLIP-seq
MIRT1451671	hsa-miR-4270	CLIP-seq
MIRT1451672	hsa-miR-4419a	CLIP-seq
MIRT1451673	hsa-miR-4441	CLIP-seq
MIRT1451674	hsa-miR-4450	CLIP-seq
MIRT1451675	hsa-miR-4465	CLIP-seq
MIRT1451676	hsa-miR-4475	CLIP-seq
MIRT1451677	hsa-miR-4510	CLIP-seq
MIRT1451678	hsa-miR-4652-3p	CLIP-seq
MIRT1451679	hsa-miR-4747-5p	CLIP-seq
MIRT1451680	hsa-miR-4755-3p	CLIP-seq
MIRT1451681	hsa-miR-4760-3p	CLIP-seq
MIRT1451682	hsa-miR-576-3p	CLIP-seq
MIRT1451683	hsa-miR-589	CLIP-seq
MIRT2135203	hsa-miR-1	CLIP-seq
MIRT2135204	hsa-miR-1184	CLIP-seq
MIRT2135205	hsa-miR-1205	CLIP-seq
MIRT2135206	hsa-miR-1207-5p	CLIP-seq
MIRT1451653	hsa-miR-1255a	CLIP-seq
MIRT1451654	hsa-miR-1255b	CLIP-seq
MIRT2135207	hsa-miR-1301	CLIP-seq
MIRT2135208	hsa-miR-143	CLIP-seq
MIRT2135209	hsa-miR-15a	CLIP-seq
MIRT2135210	hsa-miR-15b	CLIP-seq
MIRT2135211	hsa-miR-16	CLIP-seq
MIRT2135212	hsa-miR-195	CLIP-seq
MIRT2135213	hsa-miR-204	CLIP-seq
MIRT2135214	hsa-miR-206	CLIP-seq
MIRT2135215	hsa-miR-211	CLIP-seq
MIRT2135216	hsa-miR-224	CLIP-seq
MIRT1451664	hsa-miR-3126-5p	CLIP-seq
MIRT2135217	hsa-miR-3150b-3p	CLIP-seq
MIRT2135218	hsa-miR-3170	CLIP-seq
MIRT2135219	hsa-miR-3670	CLIP-seq
MIRT2135220	hsa-miR-3673	CLIP-seq
MIRT2135221	hsa-miR-3688-5p	CLIP-seq
MIRT2135222	hsa-miR-3938	CLIP-seq
MIRT2135223	hsa-miR-424	CLIP-seq
MIRT2135224	hsa-miR-4263	CLIP-seq
MIRT2135225	hsa-miR-4302	CLIP-seq
MIRT1451672	hsa-miR-4419a	CLIP-seq
MIRT1451677	hsa-miR-4510	CLIP-seq
MIRT2135226	hsa-miR-4519	CLIP-seq
MIRT2135227	hsa-miR-4660	CLIP-seq
MIRT2135228	hsa-miR-4671-5p	CLIP-seq
MIRT2135229	hsa-miR-4689	CLIP-seq
MIRT2135230	hsa-miR-4722-5p	CLIP-seq
MIRT2135231	hsa-miR-4736	CLIP-seq
MIRT2135232	hsa-miR-4755-5p	CLIP-seq
MIRT2135233	hsa-miR-4763-3p	CLIP-seq
MIRT2135234	hsa-miR-4768-3p	CLIP-seq
MIRT2135235	hsa-miR-4770	CLIP-seq
MIRT2135236	hsa-miR-4784	CLIP-seq
MIRT2135237	hsa-miR-497	CLIP-seq
MIRT2135238	hsa-miR-5047	CLIP-seq
MIRT2135239	hsa-miR-545	CLIP-seq
MIRT2135240	hsa-miR-613	CLIP-seq
MIRT2135241	hsa-miR-623	CLIP-seq
MIRT2135242	hsa-miR-625	CLIP-seq
MIRT2135243	hsa-miR-644	CLIP-seq
MIRT2135206	hsa-miR-1207-5p	CLIP-seq
MIRT2135208	hsa-miR-143	CLIP-seq
MIRT2356354	hsa-miR-149	CLIP-seq
MIRT2135209	hsa-miR-15a	CLIP-seq
MIRT2135210	hsa-miR-15b	CLIP-seq
MIRT2135211	hsa-miR-16	CLIP-seq
MIRT2135212	hsa-miR-195	CLIP-seq
MIRT1451664	hsa-miR-3126-5p	CLIP-seq
MIRT2135221	hsa-miR-3688-5p	CLIP-seq
MIRT2135223	hsa-miR-424	CLIP-seq
MIRT2135225	hsa-miR-4302	CLIP-seq
MIRT1451672	hsa-miR-4419a	CLIP-seq
MIRT1451677	hsa-miR-4510	CLIP-seq
MIRT2135230	hsa-miR-4722-5p	CLIP-seq
MIRT2135231	hsa-miR-4736	CLIP-seq
MIRT2135233	hsa-miR-4763-3p	CLIP-seq
MIRT2135234	hsa-miR-4768-3p	CLIP-seq
MIRT2135235	hsa-miR-4770	CLIP-seq
MIRT2135237	hsa-miR-497	CLIP-seq
MIRT2135239	hsa-miR-545	CLIP-seq
MIRT2356355	hsa-miR-548p	CLIP-seq
MIRT2135243	hsa-miR-644	CLIP-seq
MIRT2135206	hsa-miR-1207-5p	CLIP-seq
MIRT2135208	hsa-miR-143	CLIP-seq
MIRT1451664	hsa-miR-3126-5p	CLIP-seq
MIRT2135221	hsa-miR-3688-5p	CLIP-seq
MIRT2135225	hsa-miR-4302	CLIP-seq
MIRT1451672	hsa-miR-4419a	CLIP-seq
MIRT1451677	hsa-miR-4510	CLIP-seq
MIRT2135226	hsa-miR-4519	CLIP-seq
MIRT2135230	hsa-miR-4722-5p	CLIP-seq
MIRT2135231	hsa-miR-4736	CLIP-seq
MIRT2135233	hsa-miR-4763-3p	CLIP-seq
MIRT2135234	hsa-miR-4768-3p	CLIP-seq
MIRT2135235	hsa-miR-4770	CLIP-seq
MIRT2135243	hsa-miR-644	CLIP-seq

MIM	HGNC	e!Ensembl
619316	29011	ENSG00000168016

Protein Protein information from UniProt database. Download as csv Download as pdf
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.	O15050
Protein name	TPR and ankyrin repeat-containing protein 1 (Lupus brain antigen 1 homolog)
Family and domains
Sequence	MWDPRAARVPPRDLAVLLCNKSNAFFSLGKWNEAFVAAKECLQWDPTYVKGYYRAGYSLL RLHQPYEAARMFFEGLRLVQRSQDQAPVADFLVGVFTTMSSDSIVLQSFLPCFDHIFTTG FPTEVWQSVIEKLAKKGLWHSFLLLSAKKDRLPRNIHVPELSLKSLFEKYVFIGLYEKME QVPKLVQWLISIGASVETIGPYPLHALMRLCIQARENHLFRWLMDHKPEWKGRINQKDGD GCTVLHVVAAHSPGYLVKRQTEDVQMLLRFGADPTLLDRQSRSVVDVLKRNKNFKAIEKI NSHLEKLATCSKDLSGFSNGDGPTSENDIFRKVLEQLVKYMNSGNRLLHKNFLKQEVVQR FLRLLSTLQEIPPDLVCDINQDCATTVFKFLLEKQRWPEVLLLLTRKVSGEPPLGDCLIK DCNFSDLDICTIIPHLSTWDQRKKQLLGCLIDSGALPDGLQESQERPVVTCLKHEDFELA FLLLTKGADPRAISLTEGDTPLHAALHIFLEIKADIGFSFLSHLLDLFWSNPTEFDYLNP NVQDSNGNTLMHILFQKGMLKRVKKLLDLLVKFDINFNLKNKEGKDARHRIKKNDSLLLA WNKALMENRRRSRQDSAAHLGKLSKSTAPGHTSQLKSQGSFKSVPCGATARTLPEGSAVP DSWETLPGTQVTRKEPGALRPCSLRDCLMQDITVLIQQVEVDPSFPEDCLQSSEPLEAGA GKEGKKDDKPTLGAGAPDCSEVGEGHAQVGLGALQLVPDDNRGKEGNDDQDDWSTQEIEA CLQDFDNMTWEIECTSEMLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKG SIQLFEAKLDKGARMLWELAIDFSPRCSENPEKIIATEQNTCAMEKSGRIYTEIIRIWDI VLDHCKLADSIKAICNAYNRGLSCVLRKKLKGINKGQVSANMKIQKRIPRCYVEDTEAEK GREHVNPEYFPPASAVETEYNIMKFHSFSTNMAFNILNDTTATVEYPFRVGELEYAVIDL NPRPLEPIILIGRSGTGKTTCCLYRLWKKFHVYWEKAEQAGSPLLAKQVWLKRRLEVEPG KESPGGEEEEEEEDEEEEDSIEVETVESIDEQEYEACAGGAGVEPAGDGQAAEVCAPEHP HQLEHLHQIFVTKNHVLCQEVQRNFIELSKSTKATSHYKPLDPNIHKLQDLRDENFPLFV TSKQLLLLLDASLPKPFFLRNEDGSLKRTIIGWSAQEESTIPSWQEDEEEAEVDGDYSEE DKAVEMRTGDSDPRVYVTFEVFKNEIWPKMTKGRTAYNPALIWKEIKSFLKGSFEALSCP HGRLTEEVYKKLGRKRCPNFKEDRSEIYSLFSLYQQIRSQKGYFDEEDVLYNISRRLSKL RVLPWSIHELYGDEIQDFTQAELALLMKCINDPNSMFLTGDTAQSIMKGVAFRFSDLRSL FHYASRNTIDKQCAVRKPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDS GLFDGPKPTVLESCSVSDLAILLRGNKRKTQPIEFGAHQVILVANETAKEKIPEELGLAL VLTIYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPTSTDSREENRPLVEVPLDKPGS SQGRSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENREKRAPAFKYFIRRDFVQVV KTDENKDFDDSMFVKTSTPAEWIAQGDYYAKHQCWKVAAKCYQKGGAFEKEKLALAHDTA LSMKSKKVSPKEKQLEYLELAKTYLECKEPTLSLKCLSYAKEFQLSAQLCERLGKIRDAA YFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLKTKTLPISKLS YSASQFYLEAAAKYLSANKMKEMMAVLSKLDIEDQLVFLKSRKRLAEAADLLNREGRREE AALLMKQHGCLLEAARLTADKDFQASCLLGAARLNVARDSDIEHTKDILREALDICYQTG QLSGIAEAHFLQGVILRDFQKLRDAFFKFDTLNHSAGVVEALYEAASQCEAEPEKILGLA PGGLEILLSLVRALKRVTNNAEKEMVKSCFEFFGISQVDAKYCQIAQNDPGPILRIIFDL DLNLREKKTKDHFLIMTDQVKLALNKHLLGRLCQITRSLLGKTYRGVCMRFIVGLKCEDE NCEHFHRPLRRCEAKCLVQSKMNLVAINGLLLEAKKVFPKILAEELKEIDYILSTDMYGL CKSILDVLFPKHFHQRVLSENPMACKEILKPNYKSFRFYRFALKEYIHFLFENESARNRR ESTDLWLSAMQAFLLSSNYPEEFEKLLHQEEDNYNRELKALESEKDERGRGRGSRIKGIE GKFGMLAPNRDDENMDKTHLCFIRLLENCIDQFYVYRNPEDYKRLFFRFMNVLIKRCKEP LIPSIGNTVALLEFQFIHCGVVLARLWKNVILCLPKSYIALLHYWEFLFSKKDKELGDVF SIIQEYKPKDVTRAIQDFRFHLSYLAKVLCGYENVNFNVLLDAFSEIDYVVSGEAERTLV LCLVMLVNAEEILQPYCKPLLYRHFREIESRLQLMSMDCPGQVPERLLKVVKRVLVAVNV KSVAEALQDLLFERDEEYLMDCDWRWDPVHTKGSIVRGLYYEEVRLNRLLCLDPVDYFAE PECEFGQDEMDELALEDRDHVLATILSQKQRKASIQRKLRRACLVVSLCISWRRRVGTQM ERVREEAREPRAGNFKKADVDRTQCDLCGVKFTRGPENYFSPSKAFEGAASEVAVLSRAE LEREECQERNSESYEQHIHLEHHQRQQVAYQKYSEFFHEKVDPAIDEGKLVVQDIEQSVW IHSHVGSKEHSHMLQKVQEHIKRVSDMVEDLYRRKAWAGAEEAMTRLVNILILSVRDARD WLMKTETRLKKEGIVQEDDYENEVEDFGELRPRRRSRKCGKQRKY
Sequence length	2925
Interactions	View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Phenotype Name	Clinical Significance	Source	Reference	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal. Show/Hide Unknown Diseases (16)
ALZHEIMER DISEASE	—	GWAS catalog	37198259, 39998322	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Autism	Uncertain significance	ClinVar	—	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Autism spectrum disorder	association	ClinVar	—	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
AUTISM SPECTRUM DISORDERS	—	Disgenet	—	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
AUTISTIC DISORDER	—	Disgenet	—	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BILIRUBIN METABOLISM DISEASE	—	GWAS catalog	39024449	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BIPOLAR DISORDER	—	CTD, Disgenet, GWAS catalog CTD, Disgenet, GWAS catalog CTD, Disgenet, GWAS catalog	21926972, 24618891, 31043756, 38154582	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BIPOLAR I DISORDER, MOST RECENT EPISODE MANIC	—	Disgenet	—	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
DEPRESSION, BIPOLAR	—	Disgenet	—	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
HYPOTHYROIDISM	—	GWAS catalog	30595370	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
KLEINE-LEVIN SYNDROME	—	Disgenet, Orphanet Disgenet, Orphanet	33737391	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
METABOLIC SYNDROME	—	GWAS catalog	39349817	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
MIXED BIPOLAR I DISORDER	—	Disgenet	—	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SCHIZOPHRENIA	—	GWAS catalog	23974872, 28991256, 30285260, 31740837, 33479212	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
TYPE 2 DIABETES MELLITUS	—	GWAS catalog	32541925, 38374256, 39349817	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
ULCERATIVE COLITIS	—	GWAS catalog	38154582	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Disease Name	Disease (Merged)	Source	PMID	Relationship Type	Evidence Score
Associations from Text Mining Disease associations identified through text mining Show/Hide Text Mining Associations (13)
Bipolar Disorder	Bipolar Disorder	GWASDB_DG	22182935, 24618891		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Bipolar Disorder	Bipolar disorder	Pubtator	24280982, 24618891, 28115744, 28166306, 33737391, 40562893	Associate	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Bipolar Disorder	Bipolar Disorder	BEFREE	28115744, 28166306		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Bipolar Disorder	Bipolar Disorder	CTD_human_DG	31043756		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Breast Neoplasms	Breast neoplasm	Pubtator	26474971	Associate	★★★★★ ★☆☆☆☆ Found in Text Mining only
Depression, Bipolar	Bipolar Disorder	CTD_human_DG	31043756		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Hypothyroidism	Hypothyroidism	GWASCAT_DG	30595370		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Manic	Manic Disorder	CTD_human_DG	31043756		★★★★★ ★☆☆☆☆ Found in Text Mining only
Manic Disorder	Manic Disorder	CTD_human_DG	31043756		★★★★★ ★☆☆☆☆ Found in Text Mining only
Mental disorders	Mental Disorders	BEFREE	30135510		★★★★★ ★☆☆☆☆ Found in Text Mining only
Schizophrenia	Schizophrenia	GWASCAT_DG	28991256, 30285260		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Schizophrenia	Schizophrenia	BEFREE	29373732		★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
Schizophrenia	Schizophrenia	Pubtator	33737391	Associate	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

TRANK1 (tetratricopeptide repeat and ankyrin repeat containing 1)

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