SWT1 (SWT1 RNA endoribonuclease homolog)

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Gene miRNA Gene ontology Other IDs Protein Related genes Diseases linked via similar genes

Gene

• Entrez ID: 54823
• Gene name: SWT1 RNA endoribonuclease homolog
• Gene symbol: SWT1
• Synonyms (NCBI Gene): C1orf26, HsSwt1
• Chromosome: 1
• Chromosome location: 1q25.3

miRNA Show/Hide all (112)

miRTarBase ID	miRNA	Experiments	Reference
MIRT017232	hsa-miR-335-5p	Microarray	18185580
MIRT437534	hsa-miR-19b-3p	Immunoprecipitaion	22382630
MIRT1404875	hsa-miR-1236	CLIP-seq
MIRT1404876	hsa-miR-1271	CLIP-seq
MIRT1404877	hsa-miR-182	CLIP-seq
MIRT1404878	hsa-miR-2355-5p	CLIP-seq
MIRT1404879	hsa-miR-296-3p	CLIP-seq
MIRT1404880	hsa-miR-3157-3p	CLIP-seq
MIRT1404881	hsa-miR-326	CLIP-seq
MIRT1404882	hsa-miR-330-5p	CLIP-seq
MIRT1404883	hsa-miR-34a	CLIP-seq
MIRT1404884	hsa-miR-34c-5p	CLIP-seq
MIRT1404885	hsa-miR-3609	CLIP-seq
MIRT1404886	hsa-miR-3663-5p	CLIP-seq
MIRT1404887	hsa-miR-4286	CLIP-seq
MIRT1404888	hsa-miR-4301	CLIP-seq
MIRT1404889	hsa-miR-449a	CLIP-seq
MIRT1404890	hsa-miR-449b	CLIP-seq
MIRT1404891	hsa-miR-4504	CLIP-seq
MIRT1404892	hsa-miR-4717-3p	CLIP-seq
MIRT1404893	hsa-miR-4724-5p	CLIP-seq
MIRT1404894	hsa-miR-4792	CLIP-seq
MIRT1404895	hsa-miR-548ah	CLIP-seq
MIRT1404896	hsa-miR-548t	CLIP-seq
MIRT1404897	hsa-miR-593	CLIP-seq
MIRT1404898	hsa-miR-96	CLIP-seq
MIRT1404899	hsa-let-7a	CLIP-seq
MIRT1404900	hsa-let-7b	CLIP-seq
MIRT1404901	hsa-let-7c	CLIP-seq
MIRT1404902	hsa-let-7d	CLIP-seq
MIRT1404903	hsa-let-7e	CLIP-seq
MIRT1404904	hsa-let-7f	CLIP-seq
MIRT1404905	hsa-let-7g	CLIP-seq
MIRT1404906	hsa-let-7i	CLIP-seq
MIRT1404907	hsa-miR-1245b-3p	CLIP-seq
MIRT1404908	hsa-miR-128	CLIP-seq
MIRT1404909	hsa-miR-1321	CLIP-seq
MIRT1404910	hsa-miR-1976	CLIP-seq
MIRT1404911	hsa-miR-3064-3p	CLIP-seq
MIRT1404912	hsa-miR-3162-5p	CLIP-seq
MIRT1404913	hsa-miR-4330	CLIP-seq
MIRT1404914	hsa-miR-4458	CLIP-seq
MIRT1404915	hsa-miR-4500	CLIP-seq
MIRT1404916	hsa-miR-4722-3p	CLIP-seq
MIRT1404917	hsa-miR-4739	CLIP-seq
MIRT1404918	hsa-miR-4756-5p	CLIP-seq
MIRT1404919	hsa-miR-98	CLIP-seq
MIRT2121476	hsa-miR-4704-3p	CLIP-seq
MIRT2121477	hsa-miR-513a-3p	CLIP-seq
MIRT2343495	hsa-miR-4802-3p	CLIP-seq
MIRT2343496	hsa-miR-490-5p	CLIP-seq
MIRT2343497	hsa-miR-520d-5p	CLIP-seq
MIRT2343498	hsa-miR-524-5p	CLIP-seq
MIRT2343499	hsa-miR-561	CLIP-seq
MIRT1404899	hsa-let-7a	CLIP-seq
MIRT1404900	hsa-let-7b	CLIP-seq
MIRT1404901	hsa-let-7c	CLIP-seq
MIRT1404902	hsa-let-7d	CLIP-seq
MIRT1404903	hsa-let-7e	CLIP-seq
MIRT1404904	hsa-let-7f	CLIP-seq
MIRT1404905	hsa-let-7g	CLIP-seq
MIRT1404906	hsa-let-7i	CLIP-seq
MIRT2637205	hsa-miR-1256	CLIP-seq
MIRT1404909	hsa-miR-1321	CLIP-seq
MIRT2637206	hsa-miR-23a	CLIP-seq
MIRT2637207	hsa-miR-23b	CLIP-seq
MIRT2637208	hsa-miR-23c	CLIP-seq
MIRT2637209	hsa-miR-24	CLIP-seq
MIRT1404912	hsa-miR-3162-5p	CLIP-seq
MIRT2637210	hsa-miR-3611	CLIP-seq
MIRT2637211	hsa-miR-3612	CLIP-seq
MIRT2637212	hsa-miR-3977	CLIP-seq
MIRT2637213	hsa-miR-410	CLIP-seq
MIRT2637214	hsa-miR-4284	CLIP-seq
MIRT2637215	hsa-miR-4289	CLIP-seq
MIRT1404914	hsa-miR-4458	CLIP-seq
MIRT2637216	hsa-miR-4477b	CLIP-seq
MIRT1404915	hsa-miR-4500	CLIP-seq
MIRT2637217	hsa-miR-4528	CLIP-seq
MIRT2637218	hsa-miR-4680-5p	CLIP-seq
MIRT1404917	hsa-miR-4739	CLIP-seq
MIRT1404918	hsa-miR-4756-5p	CLIP-seq
MIRT2637219	hsa-miR-508-5p	CLIP-seq
MIRT2121477	hsa-miR-513a-3p	CLIP-seq
MIRT2637220	hsa-miR-650	CLIP-seq
MIRT1404919	hsa-miR-98	CLIP-seq
MIRT1404899	hsa-let-7a	CLIP-seq
MIRT1404900	hsa-let-7b	CLIP-seq
MIRT1404901	hsa-let-7c	CLIP-seq
MIRT1404902	hsa-let-7d	CLIP-seq
MIRT1404903	hsa-let-7e	CLIP-seq
MIRT1404904	hsa-let-7f	CLIP-seq
MIRT1404905	hsa-let-7g	CLIP-seq
MIRT1404906	hsa-let-7i	CLIP-seq
MIRT2637205	hsa-miR-1256	CLIP-seq
MIRT1404909	hsa-miR-1321	CLIP-seq
MIRT2692479	hsa-miR-219-1-3p	CLIP-seq
MIRT2637209	hsa-miR-24	CLIP-seq
MIRT1404912	hsa-miR-3162-5p	CLIP-seq
MIRT2637210	hsa-miR-3611	CLIP-seq
MIRT2637211	hsa-miR-3612	CLIP-seq
MIRT2637214	hsa-miR-4284	CLIP-seq
MIRT2637215	hsa-miR-4289	CLIP-seq
MIRT1404914	hsa-miR-4458	CLIP-seq
MIRT1404915	hsa-miR-4500	CLIP-seq
MIRT2637218	hsa-miR-4680-5p	CLIP-seq
MIRT1404917	hsa-miR-4739	CLIP-seq
MIRT1404918	hsa-miR-4756-5p	CLIP-seq
MIRT2637219	hsa-miR-508-5p	CLIP-seq
MIRT2692480	hsa-miR-627	CLIP-seq
MIRT2637220	hsa-miR-650	CLIP-seq
MIRT1404919	hsa-miR-98	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005634	Component	Nucleus	IBA

Other IDs

• MIM: 619513
• HGNC: 16785
• e!Ensembl: ENSG00000116668

Protein

• UniProt ID: Q5T5J6
• Protein name: Transcriptional protein SWT1
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF13638	PIN_4	390 → 528	PIN domain	Domain

• Tissue specificity: TISSUE SPECIFICITY: Expressed weakly in testis. {ECO:0000269|PubMed:11318611}.
• Sequence:

  MSSKESCGKKETSQRKDTTTSSPNFGEKDKKERKTPASSTSSSSIRSVSSEKRKLKSDHT
  DVLYYNIKRRQGLKRLSVEIDTLRRRPKIGSSSQRPIKLKEASYSNDNQIILQSPSSNGT
  KKDIHKCVDFKPKDIKLTNAGSKLDHGIKSLSSPKIASDVKPKAEGQASENKWSHLLVQR
  EKMKELKKGRNSKFRDNSEKCVLEKWKRNQFSQDYNSNKIIKEPLGSRRQKISFKIPIKS
  RDTLQKLVEENVFNIDSNNSKTKQEEREYLESSQVSLNVTRQKTEHLLSDFTYKRTVHEW
  KRKHHYDHQESNDSHSRENLTQSFEAPCCSVSSESIQDADQEMQIVEELHAARVGKSVDL
  PGELMSMEIDLEDDVHSSSANNTSDRKLLIVIDTNILMNHLKFVRILKTTEVPGFDKLVL
  IIPWVVMQELDRMKEGKLLKRAQHKAIPAVHFINDSLKNQDRKLWGQSIQLASQKHYGLS
  DENNDDRVLKCCLQHQELFPCSFVILCTDDRNLRNKGLISGVKSLSKEELSAELLHLSLN
  TDVCHQPCIPKQQLKAETTPLKESYKEESTNSGLSILLESIVSDLEKSLGTGLSSILETE
  MKIAFGNLWMEILYLKPPWTLLHLLQCFKKHWLAVFGLVMEKNLLLTIESLYKNLRKANK
  AVDFTTVKFLLQDSRSLLHAFSTRSNYDGILPQTFAQVNNLLQTFAEVKTKLKPNSSENT
  VTKKQEGTSLKNSHNQEITVFSSSHLPQPSRHQEIWSILESVWITIYQNSTDVFQRLGSN
  SALTTSNIASFEEAFICLQKLMAAVRDILEGIQRILAPNSNYQDVETLYNFLIKYEVNKN
  VKFTAQEIYDCVSQTEYREKLTIGCRQLVEMEYTMQQCNASVYMEAKNRGWCEDMLNYRI
  

• Sequence length: 900

Related Genes

No strongly related genes found yet for SWT1.

Diseases Linked via Similar Genes

No additional diseases found yet through genes similar to SWT1.